Job Description P15254 Confidence 99.11% Date Thu Jan 5 11:34:41 GMT 2012 Rank 47 Aligned Residues 240 % Identity 15% Template c3kizA_ PDB info PDB header:ligase Chain: A: PDB Molecule:phosphoribosylformylglycinamidine cyclo-ligase; PDBTitle: crystal structure of putative phosphoribosylformylglycinamidine cyclo-2 ligase (yp_676759.1) from cytophaga hutchinsonii atcc 33406 at 1.50 a3 resolution Resolution 1.50 Å

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		318	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.										380	.	.	.	.	.	.	.	.
Predicted Secondary structure																																																																.	.	.	.	.	.	.	.	.
Query SS confidence																																																																.	.	.	.	.	.	.	.	.
Query Sequence		D	E	G	A	T	G	R	G	A	K	P	K	A	G	L	V	G	F	S	V	S	N	L	R	I	P	G	F	E	Q	P	W	E	E	D	F	G	K	P	E	R	I	V	T	A	L	D	I	M	T	E	G	P	L	G	G	A	A	F	N	N	E	.	.	.	.	.	.	.	.	.	F	G	R	P	A	L	N	G	Y
Query Conservation																																																																.	.	.	.	.	.	.	.	.
Alig confidence								.	.									.										.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																.	.	.	.	.	.	.	.	.
Template Conservation								.	.									.										.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		D	L	I	C	V	G	.	.	A	V	D	N	I	L	L	S	.	S	T	I	G	R	N	K	N	L	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	I	P	G	E	V	L	A	A	I	I	N	G	T	E	E	V	L	Q	X	L	R	D	N	G	I	G	I	Y	S	T	G	G	E
Template Known Secondary structure				G	G	G	T	.	.			S	S					.							T	T	T	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	S																						T	T
Template Predicted Secondary structure								.	.									.										.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		92	.	.	.	.	.			.	.	100	.	.	.	.	.		.	.	.	.	110	.	.	.	.																						.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.
		389	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420	.	.	.	.	.	.	.	.		.	430	.	.	.	.	.	.	.	.	.	440	.								.	.	.	.	.	.	.	.	450	.	.	.	.	.	.	.	.
Predicted Secondary structure																																										.														.	.	.	.	.	.	.																		.	.
Query SS confidence																																										.														.	.	.	.	.	.	.																		.	.
Query Sequence		F	R	T	Y	E	E	K	V	N	S	H	N	G	E	E	L	R	G	Y	H	K	P	I	M	L	A	G	G	I	G	N	I	R	A	D	H	V	Q	K	G	.	E	I	N	V	G	A	K	L	V	V	L	G	G	.	.	.	.	.	.	.	P	A	M	N	I	G	L	G	G	G	A	A	S	S	M	A	S	.	.
Query Conservation																																										.														.	.	.	.	.	.	.																		.	.
Alig confidence													.	.	.	.	.	.	.	.	.	.	.																			.														.	.	.	.	.	.	.																		.	.
Template Conservation													.	.	.	.	.	.	.	.	.	.	.
Template Sequence		T	A	D	V	G	D	L	V	R	T	I	.	.	.	.	.	.	.	.	.	.	.	I	V	D	S	T	V	T	C	R	X	K	R	Q	D	V	I	S	N	E	N	I	K	A	G	N	V	I	V	G	F	A	S	Y	G	Q	T	S	Y	E	T	E	Y	N	G	G	X	G	S	N	G	L	T	S	A	R	H	D	V
Template Known Secondary structure						T	T	T		S	S		.	.	.	.	.	.	.	.	.	.	.												G	G	G				G	G	G			T	T								S	S	B			T	T		S	S		B				T	T	S	S
Template Predicted Secondary structure													.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		148	.	150	.	.	.	.	.	.	.	.												.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.
																								459	460	.	.	.	.	.	.	.	.	.	470	.	.	.	.	.	.	.	.	.	480	.							.	.	.	.	.	.	.	.	490	.	.	.	.	.	.	.	.	.	500	.	.	.	.	.	.	.	.	.	510
Predicted Secondary structure		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																								.	.	.	.	.	.
Query SS confidence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																								.	.	.	.	.	.
Query Sequence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	G	Q	S	D	A	D	L	D	F	A	S	V	Q	R	D	N	P	E	M	E	R	R	C	.	.	.	.	.	.	Q	E	V	I	D	R	C	W	Q	L	G	D	A	N	P	I	L	F	I	H	D	V	G	A	G	G	L	S	N
Query Conservation		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																								.	.	.	.	.	.
Alig confidence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																								.	.	.	.	.	.													.
Template Conservation																																																																	.
Template Sequence		F	N	N	V	L	A	S	K	Y	P	E	S	F	D	P	K	V	P	E	N	L	V	Y	S	G	E	X	N	L	T	D	P	Y	L	N	V	P	L	D	A	G	K	L	V	L	S	P	T	R	T	Y	A	P	L	X	K	E	I	I	H	Q	Y	K	.	G	K	L	D	G	V	V	H	C	S	G	G	G	Q	T	K
Template Known Secondary structure		B		T							G	G	G	S		T	T	S		G	G	G	S	S		S	S	B		T	T				T	T		S	S																								S	T	.	T			S							T	T	G	G	G	G
Template Predicted Secondary structure																																																																	.
Template SS confidence
		217	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.		280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.
		511	.	.	.	.	.	.	.	.	520	.	.	.	.	.	.	.	.	.	530	.	.									.	.	.	.	.	.	.	540	.	.	.	.	.	.		.	.	.	550	.	.	.	.	.	.	.	.	.	560	.	.	.	.	.	.	.	.	.	570	.	.	.	.	.	.	.	.	.	580
Predicted Secondary structure																								.	.	.	.	.	.	.	.															.																																			.
Query SS confidence																								.	.	.	.	.	.	.	.															.																																			.
Query Sequence		A	M	P	E	L	V	S	D	G	G	R	G	G	K	F	E	L	R	E	I	L	S	.	.	.	.	.	.	.	.	D	E	P	G	M	S	P	L	E	I	W	C	N	E	.	S	Q	E	R	Y	V	L	A	V	A	A	D	Q	L	P	L	F	D	E	L	C	K	R	E	R	A	P	Y	A	V	I	G	E	A	.
Query Conservation																								.	.	.	.	.	.	.	.															.																																			.
Alig confidence						.	.	.																.	.	.	.	.	.	.	.															.																																			.
Template Conservation						.	.	.
Template Sequence		V	L	H	F	.	.	.	T	D	A	T	T	H	I	I	K	D	N	L	F	D	V	P	P	L	F	Q	L	I	Q	G	Q	S	N	T	P	W	E	E	X	Y	K	V	F	N	X	G	H	R	L	E	I	Y	T	D	A	A	H	A	E	G	X	I	A	I	A	K	K	F	N	I	E	A	K	I	I	G	R	V	E
Template Known Secondary structure		G	G	G	G	.	.	.			T	T							S																T										S		T	T																						T	T
Template Predicted Secondary structure						.	.	.
Template SS confidence
		296	.	.	.				300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.
				581	.	.	.	.	.	.	.	.	590	.	.	.	.	.	.
Predicted Secondary structure		.	.
Query SS confidence		.	.
Query Sequence		.	.	T	E	E	L	H	L	S	L	H	D	R	H	F	D	N	Q
Query Conservation		.	.
Alig confidence		.	.
Template Conservation
Template Sequence		A	P	V	A	G	K	R	L	T	I	T	G	P	Q	G	T	E	Y
Template Known Secondary structure		S		B	T	T	B	S						T	T	S
Template Predicted Secondary structure
Template SS confidence
		373	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390

No model constructed - rank, confidence too low

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions