Job Description P15254 Confidence 94.57% Date Thu Jan 5 11:34:41 GMT 2012 Rank 117 Aligned Residues 95 % Identity 18% Template c3graA_ PDB info PDB header:transcription regulator Chain: A: PDB Molecule:transcriptional regulator, arac family; PDBTitle: crystal structure of arac family transcriptional regulator from2 pseudomonas putida Resolution 2.30 Å

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		1039	1040	.	.	.	.	.	.	.	.	.	1050	.	.						.	.	.	.	.	.	.	1060	.	.	.	.	.	.	.	.	.	1070	.	.	.	.	.	.	.	.	.	1080	.																	.	.	.	.	.	.	.	.	1090	.	.	.	.	.	.	.
Predicted Secondary structure																.	.	.	.	.																														.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																.	.	.	.	.																														.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		R	P	K	V	A	V	L	R	E	Q	G	V	N	S	.	.	.	.	.	H	V	E	M	A	A	A	F	H	R	A	G	F	D	A	I	D	V	H	M	S	D	L	L	T	G	R	T	G	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	L	E	D	F	H	A	L	V	A	C	G	G	F	S	Y	G
Query Conservation																.	.	.	.	.																														.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence																.	.	.	.	.																														.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																.
Template Conservation																																																																																	.
Template Sequence		P	Y	R	V	D	F	I	L	L	E	H	F	S	X	A	S	F	T	V	A	X	D	V	L	V	T	A	N	L	L	R	A	D	S	F	Q	F	T	P	L	S	L	D	G	D	R	V	L	S	D	L	G	L	E	L	V	A	T	E	L	S	A	A	A	L	K	E	L	D	L	L	V	V	C	G	G	L	R	T	.
Template Known Secondary structure											T	T	B																			S	T	T	S								S	S	S	S				B	T	T	S										S	G	G	G	T	T		S								T	T		.
Template Predicted Secondary structure																																																																																	.
Template SS confidence
		29	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.
		1098	.	1100	.	.	.	.	.	.	.	.	.	1110	.	.	.	.	.	.	.	.	.	1120	.	.	.	.	.	.	.	.	.	1130	.	.	.	.	.	.	.	.	.	1140	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		D	V	L	G	A	G	E	G	W	A	K	S	I	L	F	N	D	R	V	R	D	E	F	A	T	F	F	H	R	P	Q	T	L	A	L	G	V	C	N	G	C	Q	M	M	S	N	L	R	E	L
Query Conservation
Alig confidence		.	.	.	.	.	.	.	.	.	.	.	.																		.
Template Conservation		.	.	.	.	.	.	.	.	.	.	.	.																		.
Template Sequence		.	.	.	.	.	.	.	.	.	.	.	.	P	L	K	Y	P	E	L	D	R	L	L	N	D	C	A	A	H	.	G	X	A	L	G	G	L	W	N	G	A	W	F	L	G	R	A	G	V	L
Template Known Secondary structure		.	.	.	.	.	.	.	.	.	.	.	.		S			T	T												.	T							T	T									T
Template Predicted Secondary structure		.	.	.	.	.	.	.	.	.	.	.	.																		.
Template SS confidence
														108	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.		.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions