Job Description P15254 Confidence 95.69% Date Thu Jan 5 11:34:41 GMT 2012 Rank 113 Aligned Residues 97 % Identity 16% Template c3er6D_ PDB info PDB header:structural genomics, unknown function Chain: D: PDB Molecule:putative transcriptional regulator protein; PDBTitle: crystal structure of a putative transcriptional regulator2 protein from vibrio parahaemolyticus Resolution 1.90 Å

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		1041	.	.	.	.	.	.	.	.	1050	.			.	.	.	.	.	.	.	.	1060	.	.	.								.	.	.	.	.	.	1070	.	.	.													.	.	.	.	.	.	1080	.	.	.	.	.	.	.	.	.	1090	.	.	.	.	.	.	.	.	.
Predicted Secondary structure													.	.													.	.	.	.	.	.	.											.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence													.	.													.	.	.	.	.	.	.											.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		K	V	A	V	L	R	E	Q	G	V	N	.	.	S	H	V	E	M	A	A	A	F	H	R	A	.	.	.	.	.	.	.	G	F	D	A	I	D	V	H	M	S	.	.	.	.	.	.	.	.	.	.	.	.	D	L	L	T	G	R	T	G	L	E	D	F	H	A	L	V	A	C	G	G	F	S	Y	G	D	V
Query Conservation													.	.													.	.	.	.	.	.	.											.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence													.	.													.	.	.	.	.	.	.											.	.	.	.	.	.	.	.	.	.	.	.																							.	.	.	.
Template Conservation																																																																														.	.	.	.
Template Sequence		R	V	V	A	L	A	P	T	G	R	Y	F	A	S	I	I	S	S	L	E	I	L	E	T	A	A	E	F	A	E	F	Q	G	F	M	T	H	V	V	T	P	N	N	R	P	L	I	G	R	G	G	I	S	V	Q	P	T	A	Q	W	Q	S	F	D	F	T	N	I	L	I	I	G	S	I	G	D	.	.	.	.
Template Known Secondary structure										T	T	S																		T	T											T	T	S						T	T	S						S	S		G	G	G		S			S								S		.	.	.	.
Template Predicted Secondary structure																																																																														.	.	.	.
Template SS confidence
		10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.
		1100	.	.	.	.	.	.	.	.	.	1110	.	.	.	.	.	.	.	.	.	1120	.	.	.	.	.	.	.	.	.	1130	.	.	.	.	.	.	.	.	.	1140	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		L	G	A	G	E	G	W	A	K	S	I	L	F	N	D	R	V	R	D	E	F	A	T	F	F	H	R	P	Q	T	L	A	L	G	V	C	N	G	C	Q	M	M	S	N	L	R	E	L
Query Conservation
Alig confidence		.	.	.	.	.																							.
Template Conservation		.	.	.	.	.																							.
Template Sequence		.	.	.	.	.	P	L	E	S	L	D	K	I	D	P	A	L	F	D	W	I	R	E	L	H	L	K	.	G	S	K	I	V	A	I	D	T	G	I	F	V	V	A	K	A	G	L	L
Template Known Secondary structure		.	.	.	.	.					G	G	G	S														T	.	T							T	T									T
Template Predicted Secondary structure		.	.	.	.	.																							.
Template SS confidence
							86	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.		.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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