Job Description P15254 Confidence 100.00% Date Thu Jan 5 11:34:41 GMT 2012 Rank 2 Aligned Residues 695 % Identity 24% Template c3ac6A_ PDB info PDB header:ligase Chain: A: PDB Molecule:phosphoribosylformylglycinamidine synthase 2; PDBTitle: crystal structure of purl from thermus thermophilus Resolution 2.35 Å

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		172	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.
Predicted Secondary structure
Query SS confidence
Query Sequence		I	D	A	N	L	R	L	G	L	A	L	A	E	D	E	I	D	Y	L	Q	D	A	F	T	K	L	G	R	N	P	N	D	I	E	L	Y	M	F	A	Q	A	N	S	E	H	C	R	H	K	I	F	N	A	D	W	V	I	D	G	E	Q	Q	P	K	S	L	F	K	M	I	K	N	T	F	E	T	T	P	D	H
Query Conservation
Alig confidence											.	.												.	.	.																															.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation											.	.												.	.	.																															.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		E	A	L	A	K	E	I	G	I	.	.	P	E	G	E	Y	R	E	I	V	Q	R	.	.	.	L	G	R	E	P	N	R	V	E	L	L	L	F	K	V	X	W	S	E	H	C	A	Y	K	N	S	R	P	L	L	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	K	A	L	P	K	E	G	E	A
Template Known Secondary structure									T		.	.												.	.	.		T	S														T	S						T	T	T					.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	T	T	S					T	T
Template Predicted Secondary structure											.	.												.	.	.																															.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		2	.	.	.	.	.	.	.	10			.	.	.	.	.	.	.	.	.	20	.				.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.																	.	.	.	.	.	.	.	.	60
		252	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.
Predicted Secondary structure
Query SS confidence
Query Sequence		V	L	S	A	Y	K	D	N	A	A	V	M	E	G	S	E	V	G	R	Y	F	A	D	H	E	T	G	R	Y	D	F	H	Q	E	P	A	H	I	L	M	K	V	E	T	H	N	H	P	T	A	I	S	P	W	P	G	A	A	T	G	S	G	G	E	I	R	D	E	G	A	T	G	R	G	A	K	P	K	A	G
Query Conservation
Alig confidence															.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																																										.	.
Template Conservation															.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																																										.	.
Template Sequence		V	L	Q	G	P	G	E	N	A	G	V	V	R	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	V	G	E	G	W	A	V	A	F	K	I	E	S	H	N	H	P	S	A	V	E	P	F	Q	G	A	A	T	G	V	G	G	I	L	R	D	I	X	S	X	G	.	.	A	R	P	I	A	L
Template Known Secondary structure						T	T	S	S	S					.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.			T	T																																				T	T	.	.
Template Predicted Secondary structure															.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																																										.	.
Template SS confidence
		61	.	.	.	.	.	.	.	.	70	.	.	.																			.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.			.	.	.	.	.	120
		332	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.
Predicted Secondary structure
Query SS confidence
Query Sequence		L	V	G	F	S	V	S	N	L	R	I	P	G	F	E	Q	P	W	E	E	D	F	G	K	P	E	R	I	V	T	A	L	D	I	M	T	E	G	P	L	G	G	A	A	F	N	N	E	F	G	R	P	A	L	N	G	Y	F	R	T	Y	E	E	K	V	N	S	H	N	G	E	E	L	R	G	Y	H	K	P	I
Query Conservation
Alig confidence														.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																														.										.	.	.	.	.	.	.	.	.	.
Template Conservation														.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																														.										.	.	.	.	.	.	.	.	.	.
Template Sequence		L	D	S	L	R	F	G	P	P	E	E	A	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	R	S	R	Y	L	L	K	G	V	V	S	G	I	A	F	Y	G	N	A	I	G	V	P	T	V	G	G	D	L	.	Y	F	H	E	G	Y	R	E	N	.	.	.	.	.	.	.	.	.	.	P	L
Template Known Secondary structure								S		T	T	S		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																					T									.				G	G	G	S	S	S	.	.	.	.	.	.	.	.	.	.
Template Predicted Secondary structure														.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																														.										.	.	.	.	.	.	.	.	.	.
Template SS confidence
		121	.	.	.	.	.	.	.	.	130	.	.																		.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.		.	.	.	.	.	.	.	.	170											.	.
		412	.	.	.	.	.	.	.	420	.	.	.	.	.	.	.	.	.	430	.	.	.	.	.	.	.	.	.	440	.	.	.	.	.	.	.	.	.	450	.	.	.	.	.	.	.	.	.	460	.	.	.	.	.	.	.	.	.	470	.	.	.	.	.	.	.	.	.	480	.	.	.	.	.	.	.	.	.	490	.
Predicted Secondary structure
Query SS confidence
Query Sequence		M	L	A	G	G	I	G	N	I	R	A	D	H	V	Q	K	G	E	I	N	V	G	A	K	L	V	V	L	G	G	P	A	M	N	I	G	L	G	G	G	A	A	S	S	M	A	S	G	Q	S	D	A	D	L	D	F	A	S	V	Q	R	D	N	P	E	M	E	R	R	C	Q	E	V	I	D	R	C	W	Q	L
Query Conservation
Alig confidence																																								.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.										.	.	.
Template Conservation																																								.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.										.	.	.
Template Sequence		V	N	A	X	C	L	G	L	L	R	E	E	H	L	K	R	S	R	A	S	L	G	R	P	I	Y	Y	A	G	A	K	T	G	R	D	G	I	V	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	G	D	P	F	L	G	K	L	L	.	.	.	X	E	A	T	L	E	A
Template Known Secondary structure												G	G	G				B				T	T								S		B		S					.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.										.	.	.
Template Predicted Secondary structure																																								.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.										.	.	.
Template SS confidence
		173	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210																								.	.	.	.	.	.	.	.	.				220	.	.	.	.	.	.
		492	.	.	.	.	.	.	.	500	.	.	.	.	.	.	.	.	.	510	.	.	.	.	.	.	.	.	.	520	.	.	.	.	.	.	.	.	.	530	.	.	.	.	.	.	.	.	.	540	.	.	.	.	.	.	.	.	.	550	.	.	.	.	.	.	.	.	.	560	.	.	.	.	.	.	.	.	.	570	.
Predicted Secondary structure
Query SS confidence
Query Sequence		G	D	A	N	P	I	L	F	I	H	D	V	G	A	G	G	L	S	N	A	M	P	E	L	V	S	D	G	G	R	G	G	K	F	E	L	R	E	I	L	S	D	E	P	G	M	S	P	L	E	I	W	C	N	E	S	Q	E	R	Y	V	L	A	V	A	A	D	Q	L	P	L	F	D	E	L	C	K	R	E	R
Query Conservation
Alig confidence
Template Conservation
Template Sequence		I	E	L	D	L	V	E	G	V	Q	D	X	G	A	A	G	L	T	S	S	L	S	E	L	A	H	K	S	G	L	G	V	E	L	H	L	D	L	V	P	T	R	E	E	G	X	T	P	E	E	L	L	L	S	E	S	Q	E	R	X	V	L	V	P	K	E	G	K	E	K	A	L	E	E	V	F	G	R	W	G
Template Known Secondary structure				T	T										T	T													T	T	S						G	G	G	S		B	S	S	S	S												S	S								T	T												T	T
Template Predicted Secondary structure
Template SS confidence
		249	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.
		572	.	.	.	.	.	.	.	580	.	.	.	.	.	.	.	.	.	590	.	.	.	.	.	.	.	.	.	600	.	.	.	.	.	.	.	.	.	610	.	.	.	.				.	.	.	.	.	620	.	.	.	.	.	.	.	.	.	630	.	.	.	.	.	.	.	.	.	640	.	.	.	.	.	.	.	.
Predicted Secondary structure																																													.	.	.
Query SS confidence																																													.	.	.
Query Sequence		A	P	Y	A	V	I	G	E	A	T	E	E	L	H	L	S	L	H	D	R	H	F	D	N	Q	P	I	D	L	P	L	D	V	L	L	G	K	T	P	K	M	T	R	.	.	.	D	V	Q	T	L	K	A	K	G	D	A	L	A	R	E	G	I	T	I	A	D	A	V	K	R	V	L	H	L	P	T	V	A	E
Query Conservation																																													.	.	.
Alig confidence																						.	.																						.	.	.
Template Conservation																						.	.
Template Sequence		L	D	C	V	P	V	A	R	T	I	P	E	R	V	F	R	V	L	F	R	.	.	G	E	V	V	A	E	V	P	T	E	A	L	A	E	A	P	T	Y	V	R	V	G	R	E	D	P	E	V	R	R	L	R	E	T	P	I	P	P	L	E	A	D	P	Q	E	V	L	R	R	L	L	A	S	P	N	L	A	S
Template Known Secondary structure												S	S	S							T	.	.	T													S																			T	S																		T	S	T	T	T	S
Template Predicted Secondary structure																						.	.
Template SS confidence
		329	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.			.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.
		649	650	.	.	.	.	.	.	.	.	.	660	.	.	.	.	.	.	.	.	.	670	.	.	.	.	.	.	.	.	.	680	.	.	.	.	.	.	.	.	.	690	.	.	.	.	.	.	.	.	.	700	.	.	.	.	.	.	.	.	.	710	.	.	.	.	.	.	.	.	.	720	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		K	T	F	L	V	T	I	G	D	R	S	V	T	G	M	V	A	R	D	Q	M	V	G	P	W	Q	V	P	V	A	N	C	A	V	T	T	A	S	L	D	S	Y	Y	G	E	A	M	A	I	G	E	R	A	P	V	A	L	L	D	F	A	A	S	A	R	L	A	V	G	E	A	L	T	N	I	A	A	T	Q	I
Query Conservation
Alig confidence																									.	.	.	.	.	.	.									.
Template Conservation																									.	.	.	.	.	.	.									.
Template Sequence		R	E	A	V	Y	E	R	Y	D	H	Q	V	G	T	R	T	A	L	L	P	G	K	G	.	.	.	.	.	.	.	D	A	A	V	L	W	I	K	.	G	T	R	L	G	V	A	A	K	V	D	Q	N	P	R	Y	S	R	L	H	P	R	L	G	A	X	H	A	L	A	E	A	C	R	N	V	S	V	V	G	A
Template Known Secondary structure							T	T					B		S	S						S			.	.	.	.	.	.	.	S	S						T	.	T	S	S																																				T	T
Template Predicted Secondary structure																									.	.	.	.	.	.	.									.
Template SS confidence
		407	.	.	410	.	.	.	.	.	.	.	.	.	420	.	.	.	.	.	.	.	.	.								430	.	.	.	.	.	.	.		.	.	440	.	.	.	.	.	.	.	.	.	450	.	.	.	.	.	.	.	.	.	460	.	.	.	.	.	.	.	.	.	470	.	.	.	.	.	.	.	.
		729	730	.	.	.	.	.	.	.	.	.	740	.	.	.	.	.	.	.	.	.	750	.	.	.	.	.	.	.	.	.	760	.	.	.	.	.	.	.	.	.	770	.	.	.	.	.	.	.	.	.	780	.	.	.	.	.	.	.	.	.	790	.	.	.	.	.	.	.	.	.	800	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		G	D	I	K	R	I	K	L	S	A	N	W	M	A	A	A	G	H	P	G	E	D	A	G	L	Y	E	A	V	K	A	V	G	E	E	L	C	P	A	L	G	L	T	I	P	V	G	K	D	S	M	S	M	K	T	R	W	Q	E	G	N	E	E	R	E	M	T	S	P	L	S	L	V	I	S	A	F	A	R	V
Query Conservation
Alig confidence										.					.																			.																					.	.	.	.	.	.	.	.
Template Conservation										.					.																			.																					.	.	.	.	.	.	.	.
Template Sequence		K	P	L	A	Y	T	D	G	.	L	N	L	G	.	S	P	E	T	P	E	G	Y	H	E	L	A	E	T	I	A	G	L	.	K	E	A	S	E	A	L	G	V	P	V	V	S	G	N	V	S	L	Y	N	.	.	.	.	.	.	.	.	E	S	G	G	K	R	I	P	P	T	A	X	V	G	V	V	G	V	L
Template Known Secondary structure										.				S	.		S	S	S															.								T													.	.	.	.	.	.	.	.			T	T
Template Predicted Secondary structure										.					.																			.																					.	.	.	.	.	.	.	.
Template SS confidence
		479	480	.	.	.	.	.	.		.	.	.	490		.	.	.	.	.	.	.	.	.	500	.	.	.	.	.	.	.	.		.	510	.	.	.	.	.	.	.	.	.	520	.	.	.	.	.	.	.	.									.	530	.	.	.	.	.	.	.	.	.	540	.	.	.	.	.	.	.
		809	810	.	.	.	.	.	.	.	.	.	820	.	.	.	.	.	.	.	.	.	830	.	.	.	.	.	.	.	.	.	840	.	.	.	.	.	.	.	.	.	850	.	.	.	.	.	.	.	.	.	860	.	.	.	.	.	.	.	.	.	870	.	.	.	.	.	.	.	.	.	880	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		E	D	V	R	H	T	I	T	P	Q	L	S	T	E	D	N	A	L	L	L	I	D	L	G	K	G	N	N	A	L	G	A	T	A	L	A	Q	V	Y	R	Q	L	G	D	K	P	A	D	V	R	D	V	A	Q	L	K	G	F	Y	D	A	I	Q	A	L	V	A	Q	R	K	L	L	A	Y	H	D	R	S	D	G
Query Conservation
Alig confidence		.																					.	.
Template Conservation		.																					.	.
Template Sequence		.	E	V	D	K	R	A	E	X	G	F	R	R	P	G	E	V	L	L	L	I	.	.	G	E	E	R	G	E	L	G	A	S	E	V	L	Y	L	L	T	G	K	E	F	G	H	P	P	R	L	D	L	G	R	E	K	A	V	Q	E	A	I	R	D	L	I	Q	R	G	L	T	R	T	A	H	D	V	A	E	G
Template Known Secondary structure		.		G	G	G			B	S	S			S	T	T							.	.	S		S			B		T	T									S				S																							T	T	S		S	B						T	T
Template Predicted Secondary structure		.																					.	.
Template SS confidence
			548	.	550	.	.	.	.	.	.	.	.	.	560	.	.	.	.	.	.	.			.	.	570	.	.	.	.	.	.	.	.	.	580	.	.	.	.	.	.	.	.	.	590	.	.	.	.	.	.	.	.	.	600	.	.	.	.	.	.	.	.	.	610	.	.	.	.	.	.	.	.	.	620	.	.	.	.
		889	890	.	.	.	.	.	.	.	.	.	900	.	.	.	.	.	.	.	.	.	910	.	.	.	.	.	.	.	.	.	920	.	.	.	.	.	.		.	.	.	930	.	.	.	.	.	.	.	.	.	940	.	.	.	.	.	.	.	.	.	950	.	.	.	.	.	.	.	.	.	960	.	.	.	.	.	.	.
Predicted Secondary structure																																								.
Query SS confidence																																								.
Query Sequence		G	L	L	V	T	L	A	E	M	A	F	A	G	H	C	G	I	D	A	D	I	A	T	L	G	D	D	R	L	A	A	L	F	N	E	E	L	G	.	A	V	I	Q	V	R	A	A	D	R	E	A	V	E	S	V	L	A	Q	H	G	L	A	D	C	V	H	Y	V	G	Q	A	V	S	G	D	R	F	V	I	T
Query Conservation																																								.
Alig confidence																									.	.	.													.																								.	.									.
Template Conservation																									.	.	.																																					.	.									.
Template Sequence		G	L	L	L	A	L	A	E	X	T	F	P	Y	G	V	G	A	T	V	E	V	R	E	.	.	.	E	G	L	E	A	L	F	G	E	A	P	S	R	V	L	F	T	V	E	K	T	R	L	Q	E	A	T	L	L	L	E	E	R	G	L	P	.	.	Y	R	V	L	G	E	T	G	.	G	K	S	L	T	V	L
Template Known Secondary structure										T	T	T	T	T									S		.	.	.		S					T		B		S	S								G	G	G											T	T			.	.									.	S	S
Template Predicted Secondary structure																									.	.	.																																					.	.									.
Template SS confidence
		625	.	.	.	.	630	.	.	.	.	.	.	.	.	.	640	.	.	.	.	.	.	.				.	.	650	.	.	.	.	.	.	.	.	.	660	.	.	.	.	.	.	.	.	.	670	.	.	.	.	.	.	.	.	.	680	.	.	.			.	.	.	.	.	.	690	.		.	.	.	.	.	.	.
		968	.	970	.	.	.	.	.	.	.	.	.	980	.	.	.	.	.	.	.	.	.	990	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		A	N	G	Q	T	V	F	S	E	S	R	T	T	L	R	V	W	W	A	E	T	T	W	Q	M
Query Conservation
Alig confidence								.
Template Conservation								.
Template Sequence		T	P	G	G	V	L	.	E	W	S	L	E	E	L	L	S	A	W	K	A	P	L	R	E	V
Template Known Secondary structure			T	T				.
Template Predicted Secondary structure								.
Template SS confidence
		699	700	.	.	.	.		.	.	.	.	.	710	.	.	.	.	.	.	.	.	.	720	.	.