Job Description P15254 Confidence 100.00% Date Thu Jan 5 11:34:41 GMT 2012 Rank 20 Aligned Residues 293 % Identity 17% Template c2z1tA_ PDB info PDB header:lyase Chain: A: PDB Molecule:hydrogenase expression/formation protein hype; PDBTitle: crystal structure of hydrogenase maturation protein hype Resolution 2.60 Å

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		241	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.		.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.
Predicted Secondary structure																																																											.
Query SS confidence																																																											.
Query Sequence		I	K	N	T	F	E	T	T	P	D	H	V	L	S	A	Y	K	D	N	A	A	V	M	E	G	S	E	V	G	R	Y	F	A	D	H	E	T	G	R	Y	D	F	H	Q	E	P	A	H	I	L	M	K	V	E	T	H	N	.	H	P	T	A	I	S	P	W	P	G	A	A	T	G	S	G	G	E	I	R	D	E
Query Conservation																																																											.
Alig confidence																										.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.					.	.										.
Template Conservation																										.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.					.	.
Template Sequence		I	S	D	L	F	L	R	H	F	D	N	P	I	L	G	T	L	N	D	A	A	R	L	D	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	L	T	G	P	.	.	L	A	M	S	T	D	S	Y	T	V	D	P	I	F	F	P	G	G	D	I	G	T	L	A	V	H	G	T	V	N	D	V
Template Known Secondary structure													T	T	T	T	T			S	S					.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.			S	S	.	.											S	S	S			T	T
Template Predicted Secondary structure																										.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.					.	.
Template SS confidence
		21	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.																			.	.	.	.			.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80
		320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		G	A	T	G	R	G	A	K	P	K	A	G	L	V	G	F	S	V	S	N	L	R	I	P	G	F	E	Q	P	W	E	E	D	F	G	K	P	E	R	I	V	T	A	L	D	I	M	T	E	G	P	L	G	G	A	A	F	N	N	E	F	G	R	P	A	L	N	G	Y	F	R	T	Y	E	E	K	V	N	S	H
Query Conservation
Alig confidence						.	.																.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																														.
Template Conservation						.	.																.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																														.
Template Sequence		S	M	L	G	.	.	A	R	P	R	Y	L	S	C	G	F	I	L	E	E	G	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	L	D	M	D	I	L	E	R	V	V	A	S	M	G	K	A	A	R	E	A	G	V	F	I	V	T	G	D	T	.	K	V	V	P	R	G	A	C	D
Template Known Secondary structure			T	T	T	.	.														T	T	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																					T									.					B	T	T	B	S
Template Predicted Secondary structure						.	.																.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																														.
Template SS confidence
		81	.	.	.			.	.	.	.	.	90	.	.	.	.	.	.	.	.	.																					100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.		.	130	.	.	.	.	.	.	.
		400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420	.	.	.	.		.	.	.	.	.	430	.	.	.	.	.	.	.	.	.	440	.	.	.	.	.	.	.	.	.	450	.	.	.	.	.	.	.	.	.	460	.	.	.	.	.	.	.	.	.	470	.	.	.	.	.	.	.	.
Predicted Secondary structure																											.
Query SS confidence																											.
Query Sequence		N	G	E	E	L	R	G	Y	H	K	P	I	M	L	A	G	G	I	G	N	I	R	A	D	H	.	V	Q	K	G	E	I	N	V	G	A	K	L	V	V	L	G	G	P	A	M	N	I	G	L	G	G	G	A	A	S	S	M	A	S	G	Q	S	D	A	D	L	D	F	A	S	V	Q	R	D	N	P	E	M	E
Query Conservation																											.
Alig confidence			.	.	.	.	.	.	.	.	.																.															.	.	.	.
Template Conservation			.	.	.	.	.	.	.	.	.																															.	.	.	.
Template Sequence		K	.	.	.	.	.	.	.	.	.	M	F	I	N	T	T	G	I	G	E	I	L	V	D	P	A	P	S	G	D	R	A	R	P	G	D	A	I	L	I	.	.	.	.	S	G	S	M	G	D	H	G	L	T	I	L	S	Q	R	Q	G	L	N	F	A	A	D	V	C	S	D	S	A	S	L	N	R	V	V	E
Template Known Secondary structure		S	.	.	.	.	.	.	.	.	.														S	S				T	T				T	T						.	.	.	.	S	S		S	S										T	T	T					T	T
Template Predicted Secondary structure			.	.	.	.	.	.	.	.	.																															.	.	.	.
Template SS confidence
		138										.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.					.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.
		479	480	.	.	.	.	.	.	.	.	.	490	.	.	.	.	.	.	.	.	.	500	.	.	.	.	.	.	.	.	.	510	.	.	.	.	.	.	.	.	.	520	.	.	.	.	.	.	.	.	.	530	.	.	.	.	.	.	.	.	.	540	.	.	.	.	.	.						.	.	.	550	.	.	.
Predicted Secondary structure																																																																						.	.	.	.	.
Query SS confidence																																																																						.	.	.	.	.
Query Sequence		R	R	C	Q	E	V	I	D	R	C	W	Q	L	G	D	A	N	P	I	L	F	I	H	D	V	G	A	G	G	L	S	N	A	M	P	E	L	V	S	D	G	G	R	G	G	K	F	E	L	R	E	I	L	S	D	E	P	G	M	S	P	L	E	I	W	C	N	E	.	.	.	.	.	S	Q	E	R	Y	V	L
Query Conservation																																																																						.	.	.	.	.
Alig confidence					.	.	.	.	.	.	.	.	.	.																																																								.	.	.	.	.
Template Conservation					.	.	.	.	.	.	.	.	.	.
Template Sequence		K	L	V	.	.	.	.	.	.	.	.	.	.	L	E	V	G	D	I	H	V	L	R	D	P	T	R	G	G	L	A	T	T	L	N	E	I	A	G	Q	S	Q	A	V	C	H	V	L	E	T	A	V	P	V	R	E	S	V	R	N	G	C	S	F	L	G	L	D	P	L	Y	L	A	N	E	G	K	L	I	C
Template Known Secondary structure					.	.	.	.	.	.	.	.	.	.			T											T	T														T	S						G	G	G	S													T	T			T	T	T	S			S	S
Template Predicted Secondary structure					.	.	.	.	.	.	.	.	.	.
Template SS confidence
		205	.	.											.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.
		554	.	.	.	.	.	560	.	.	.	.	.	.	.	.	.	570			.	.	.	.	.	.	.	.	.	580	.	.	.	.	.	.	.	.	.	590	.	.	.	.	.	.	.	.	.	600	.
Predicted Secondary structure																			.	.
Query SS confidence																			.	.
Query Sequence		A	V	A	A	D	Q	L	P	L	F	D	E	L	C	K	R	E	.	.	R	A	P	Y	A	V	I	G	E	A	T	E	E	L	H	L	S	L	H	D	R	H	F	D	N	Q	P	I	D	L	P
Query Conservation																			.	.
Alig confidence																			.	.																						.	.
Template Conservation																																										.	.
Template Sequence		I	L	P	E	E	R	A	E	A	A	L	A	V	L	R	E	G	P	H	G	E	H	A	A	R	I	G	S	V	K	S	V	G	E	L	G	A	A	R	A	.	.	G	Q	V	V	M	E	T	A
Template Known Secondary structure																	T	S	T	T	G	G	G										T	T	S	S	S	S			T	.	.	T							T
Template Predicted Secondary structure																																										.	.
Template SS confidence
		275	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.			.	.	.	.	.	320	.	.

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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