Job Description P15254 Confidence 100.00% Date Thu Jan 5 11:34:41 GMT 2012 Rank 16 Aligned Residues 281 % Identity 21% Template c2z1eA_ PDB info PDB header:transferase Chain: A: PDB Molecule:hydrogenase expression/formation protein hype; PDBTitle: crystal structure of hype from thermococcus kodakaraensis (outward2 form) Resolution 1.55 Å

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		255	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.		.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.
Predicted Secondary structure																																													.
Query SS confidence																																													.
Query Sequence		A	Y	K	D	N	A	A	V	M	E	G	S	E	V	G	R	Y	F	A	D	H	E	T	G	R	Y	D	F	H	Q	E	P	A	H	I	L	M	K	V	E	T	H	N	.	H	P	T	A	I	S	P	W	P	G	A	A	T	G	S	G	G	E	I	R	D	E	G	A	T	G	R	G	A	K	P	K	A	G	L	V
Query Conservation																																													.
Alig confidence												.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.					.											.																											.	.
Template Conservation												.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.					.																																						.	.
Template Sequence		G	E	L	D	D	G	A	T	I	P	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	F	G	D	K	.	H	I	V	F	T	I	D	G	H	T	V	K	P	L	F	F	P	G	G	D	I	G	R	L	A	V	S	G	T	V	N	D	L	A	V	M	G	.	.	A	E	P	I	A	L	A	N
Template Known Secondary structure						S						.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.		T	T		.												S	S	S			T	T																	T	T	T	.	.
Template Predicted Secondary structure												.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.					.																																						.	.
Template SS confidence
		13	.	.	.	.	.	.	20	.	.																			.	.	.	.		.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.			.	.	.	.	.	.	70	.
		334	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		G	F	S	V	S	N	L	R	I	P	G	F	E	Q	P	W	E	E	D	F	G	K	P	E	R	I	V	T	A	L	D	I	M	T	E	G	P	L	G	G	A	A	F	N	N	E	F	G	R	P	A	L	N	G	Y	F	R	T	Y	E	E	K	V	N	S	H	N	G	E	E	L	R	G	Y	H	K	P	I	M	L
Query Conservation
Alig confidence									.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																														.									.	.	.	.	.	.	.	.	.	.	.
Template Conservation									.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																														.									.	.	.	.	.	.	.	.	.	.	.
Template Sequence		S	M	I	I	G	E	G	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	L	D	M	E	V	L	K	R	V	L	K	S	M	D	E	T	A	R	E	V	P	V	P	I	V	T	G	D	T	.	K	V	V	E	D	K	I	E	.	.	.	.	.	.	.	.	.	.	.	M	F	V	I
Template Known Secondary structure							T	T	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																				T	T									.				S	S	S			.	.	.	.	.	.	.	.	.	.	.
Template Predicted Secondary structure									.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																														.									.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		98	.	100	.	.	.	.																					.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.		.	.	.	.	.	.	140	.												.	.	.	.
		414	.	.	.	.	.	420	.	.	.	.	.	.	.	.	.	430	.	.	.	.	.	.	.	.	.	440	.	.	.	.	.	.	.	.	.	450	.	.	.	.	.	.	.	.	.	460	.	.	.	.	.	.	.	.	.	470	.	.	.	.	.	.	.	.	.	480	.	.	.	.	.	.	.	.	.	490	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		A	G	G	I	G	N	I	R	A	D	H	V	Q	K	G	E	I	N	V	G	A	K	L	V	V	L	G	G	P	A	M	N	I	G	L	G	G	G	A	A	S	S	M	A	S	G	Q	S	D	A	D	L	D	F	A	S	V	Q	R	D	N	P	E	M	E	R	R	C	Q	E	V	I	D	R	C	W	Q	L	G	D
Query Conservation
Alig confidence											.																.	.	.	.																			.	.	.	.	.																	.	.	.
Template Conservation											.																.	.	.	.																			.	.	.	.	.																	.	.	.
Template Sequence		T	A	G	I	G	I	A	E	H	.	P	V	S	D	A	G	A	K	V	G	D	A	V	L	V	.	.	.	.	S	G	T	I	G	D	H	G	I	A	L	M	S	H	R	E	G	I	.	.	.	.	.	A	F	E	T	E	L	K	S	D	V	A	P	I	W	D	V	.	.	.	V	K	A	V	A	E	T	I	G
Template Known Secondary structure									S	S	.				T	T				T	T						.	.	.	.	S	S		S	S											T	T		.	.	.	.	.			S	S													.	.	.
Template Predicted Secondary structure											.																.	.	.	.																			.	.	.	.	.																	.	.	.
Template SS confidence
		146	.	.	.	150	.	.	.	.		.	.	.	.	.	160	.	.	.	.	.	.	.	.	.					170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.						.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.				.	.	.	.	.	.	210	.	.
		494	.	.	.	.	.	500	.	.	.	.	.	.	.	.	.	510	.	.	.	.	.	.	.	.	.	520	.	.	.	.	.	.	.	.	.	530	.	.	.	.	.	.	.	.	.	540	.	.						.	.	.	.	.	.	.	550	.	.	.	.	.	.	.	.	.	560	.	.	.	.	.	.	.	.
Predicted Secondary structure																																																			.	.	.	.	.
Query SS confidence																																																			.	.	.	.	.
Query Sequence		A	N	P	I	L	F	I	H	D	V	G	A	G	G	L	S	N	A	M	P	E	L	V	S	D	G	G	R	G	G	K	F	E	L	R	E	I	L	S	D	E	P	G	M	S	P	L	E	I	.	.	.	.	.	W	C	N	E	S	Q	E	R	Y	V	L	A	V	A	A	D	Q	L	P	L	F	D	E	L	C	K
Query Conservation																																																			.	.	.	.	.
Alig confidence																																																			.	.	.	.	.
Template Conservation
Template Sequence		W	E	N	I	H	A	M	K	D	P	T	R	A	G	L	S	N	A	L	N	E	I	A	R	K	S	N	V	G	I	L	V	R	E	A	D	I	P	I	R	P	E	V	R	A	A	S	E	M	L	G	I	S	P	Y	D	V	A	N	E	G	K	V	V	M	V	V	A	R	E	Y	A	E	E	A	L	E	A	M	R
Template Known Secondary structure		G	G	G									T	T														T							G	G	G	S														T			G	G	G	S			S	S								G	G	G
Template Predicted Secondary structure
Template SS confidence
		213	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.
		569	570			.	.	.	.	.	.	.	.	.	580	.	.	.	.	.			.	.	.	.	590	.	.	.	.	.	.	.	.	.	600	.
Predicted Secondary structure				.	.																.	.
Query SS confidence				.	.																.	.
Query Sequence		R	E	.	.	R	A	P	Y	A	V	I	G	E	A	T	E	E	L	H	.	.	L	S	L	H	D	R	H	F	D	N	Q	P	I	D	L	P
Query Conservation				.	.																.	.
Alig confidence				.	.																.	.
Template Conservation
Template Sequence		K	T	E	K	G	R	N	A	A	I	I	G	E	V	I	A	D	Y	R	G	K	V	L	L	E	T	G	I	G	G	K	R	F	M	E	P	P
Template Known Secondary structure		T	S	S	T	T	T	T									S	S	S	T	T							T	T	S								S
Template Predicted Secondary structure
Template SS confidence
		293	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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