Job Description P15254 Confidence 100.00% Date Thu Jan 5 11:34:41 GMT 2012 Rank 18 Aligned Residues 278 % Identity 17% Template c2yxzA_ PDB info PDB header:transferase Chain: A: PDB Molecule:thiamin-monophosphate kinase; PDBTitle: crystal structure of tt0281 from thermus thermophilus hb8 Resolution 1.90 Å

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		238	.	240	.	.	.		.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.				.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.
Predicted Secondary structure								.																																																			.	.	.
Query SS confidence								.																																																			.	.	.
Query Sequence		F	K	M	I	K	N	.	T	F	E	T	T	P	D	H	V	L	S	A	Y	K	D	N	A	A	V	M	E	G	S	E	V	G	R	Y	F	A	D	H	E	T	G	R	Y	D	F	H	Q	E	P	A	H	I	L	M	K	V	.	.	.	E	T	H	N	H	P	T	A	I	S	P	W	P	G	A	A	T	G	S	G
Query Conservation								.																																																			.	.	.
Alig confidence								.																						.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.												.	.	.
Template Conservation																														.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		R	A	L	L	A	R	L	A	P	L	G	Y	P	P	E	A	P	L	P	P	G	D	D	A	G	G	V	W	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	A	E	G	R	A	W	L	L	K	T	D	G	F	L	Y	R	E	V	A	L	K	G	M	G	P	F	E	V	G	F	R	G	V	A
Template Known Secondary structure									T	T	T	T			T	T		S	S		T	T	S	S	S					.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.		T	T																		T	T
Template Predicted Secondary structure																														.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		9	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.																			.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70
		314	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		G	E	I	R	D	E	G	A	T	G	R	G	A	K	P	K	A	G	L	V	G	F	S	V	S	N	L	R	I	P	G	F	E	Q	P	W	E	E	D	F	G	K	P	E	R	I	V	T	A	L	D	I	M	T	E	G	P	L	G	G	A	A	F	N	N	E	F	G	R	P	A	L	N	G	Y	F	R	T	Y	E
Query Conservation
Alig confidence												.	.																.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																														.
Template Conservation												.	.																.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																														.
Template Sequence		A	T	A	S	D	L	L	A	K	M	.	.	G	R	P	L	G	F	T	L	G	L	F	L	P	E	D	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	L	E	E	G	F	V	L	E	L	V	R	G	A	A	E	A	A	K	R	L	G	A	F	L	L	G	G	D	T	.	N	R	G
Template Known Secondary structure										T	T	.	.														T	T	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																				T	T									.
Template Predicted Secondary structure												.	.																.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																														.
Template SS confidence
		71	.	.	.	.	.	.	.	.	80			.	.	.	.	.	.	.	.	.	90	.	.	.	.	.																					.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.		.	.	.
		394	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420	.	.	.	.	.	.	.	.	.	430	.	.	.	.	.	.	.	.	.	440	.	.	.	.	.	.	.	.	.	450	.	.	.	.	.	.	.	.	.	460	.	.	.	.	.	.	.	.	.	470	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		E	K	V	N	S	H	N	G	E	E	L	R	G	Y	H	K	P	I	M	L	A	G	G	I	G	N	I	R	A	D	H	V	Q	K	G	E	I	N	V	G	A	K	L	V	V	L	G	G	P	A	M	N	I	G	L	G	G	G	A	A	S	S	M	A	S	G	Q	S	D	A	D	L	D	F	A	S	V	Q	R	D
Query Conservation
Alig confidence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																																																								.
Template Conservation		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																																																								.
Template Sequence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	V	E	V	A	L	T	V	S	G	Y	A	L	A	E	A	P	L	P	R	K	A	L	P	G	D	L	L	Y	L	A	G	D	R	W	G	R	T	G	A	A	I	R	A	H	Y	E	G	R	S	L	E	G	F	P	K	.	I	R	E	A	A	F	Y	P
Template Known Secondary structure		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	S	S												S	S				S				T	T							S	S		T	T												T				T	T				.
Template Predicted Secondary structure		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																																																								.
Template SS confidence
																		128	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.		.	.	.	.	.	.	.	190
		474	.	.	.	.	.	480	.	.	.	.	.	.	.	.	.	490	.	.	.	.	.	.	.	.	.	500	.	.	.	.	.	.	.	.	.	510	.	.	.	.	.	.	.	.	.	520	.	.	.	.	.	.	.	.	.	530	.	.	.	.								.	.	.	.	.	540	.	.	.	.	.	.
Predicted Secondary structure																																																															.	.	.	.	.	.	.
Query SS confidence																																																															.	.	.	.	.	.	.
Query Sequence		N	P	E	M	E	R	R	C	Q	E	V	I	D	R	C	W	Q	L	G	D	A	N	P	I	L	F	I	H	D	V	G	A	G	G	L	S	N	A	M	P	E	L	V	S	D	G	G	R	G	G	K	F	E	L	R	E	I	L	S	D	E	.	.	.	.	.	.	.	P	G	M	S	P	L	E	I	W	C	N	E
Query Conservation																																																															.	.	.	.	.	.	.
Alig confidence								.	.	.	.	.	.	.	.	.	.	.															.														.	.	.														.	.	.	.	.	.	.
Template Conservation								.	.	.	.	.	.	.	.	.	.	.															.														.	.	.
Template Sequence		L	P	R	L	E	L	.	.	.	.	.	.	.	.	.	.	.	L	A	L	S	G	L	L	R	G	S	L	D	S	S	.	D	G	L	A	E	T	L	W	Q	L	A	D	L	.	.	.	G	V	G	V	E	V	E	A	L	P	L	Y	P	D	V	L	A	F	A	G	S	E	E	A	A	L	E	L	V	L	Y	G
Template Known Secondary structure					G	G	G	.	.	.	.	.	.	.	.	.	.	.	G	G	G	T	T	T		S						S	.	S											T	T	.	.	.	T																			S	S										S
Template Predicted Secondary structure								.	.	.	.	.	.	.	.	.	.	.															.														.	.	.
Template SS confidence
		191	.	.	.	.	.												.	.	.	200	.	.	.	.	.	.	.	.	.	210		.	.	.	.	.	.	.	.	.	220	.	.	.				.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.
		547	.	.		550	.	.	.	.	.	.	.	.	.	560	.	.	.	.	.	.	.	.	.	570	.	.	.	.	.	.	.	.	.	580	.	.	.	.	.	.	.	.
Predicted Secondary structure					.
Query SS confidence					.
Query Sequence		S	Q	E	.	R	Y	V	L	A	V	A	A	D	Q	L	P	L	F	D	E	L	C	K	R	E	R	A	P	Y	A	V	I	G	E	A	T	E	E	L	H	L	S	L
Query Conservation					.
Alig confidence					.
Template Conservation
Template Sequence		G	E	E	F	E	A	V	L	V	V	P	Q	E	G	A	A	A	V	E	A	R	A	K	A	K	G	L	P	L	F	R	A	G	R	V	V	A	G	E	G	V	Y	L
Template Known Secondary structure													S	T	T											T	T											S	S	S
Template Predicted Secondary structure
Template SS confidence
		256	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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