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Job DescriptionP15254
Confidence98.37%DateThu Jan 5 11:34:41 GMT 2012
Rank78Aligned Residues161
% Identity19%Templatec2vxoB_
PDB info PDB header:ligaseChain: B: PDB Molecule:gmp synthase [glutamine-hydrolyzing]; PDBTitle: human gmp synthetase in complex with xmp
Resolution2.5 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   1044.....1050.........1060.........1070.........1080.........1090.........1100.........1110.........1120...
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Query Sequence  VLREQGVNSHVEMAAAFHRAGFDAIDVHMSDLLTGRTGLEDFHALVACGGFSYGDVLGAGEGWAKSILFNDRVRDEFATF
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Template Sequence  VILDAGAQYGKVIDRRVRELFVQS. EIFPLETPAFAIKEQGFRAIIISGGPNSVYAEDAPW. FDPAIFTI. . . . . . . . . .
Template Known Secondary structure  SSSSTT

.TT

T
S

S

TTSTT


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GGGGTS..........
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   2930.........40.........50.. .......60.........70.........80........ .90......
 
   1124.....1130.........1140.........1150.........1160.........1170.........1180.........1190.........1200...
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Query Sequence  FHRPQTLALGVCNGCQMMSNLRELIPGSELWPRFVRNTSDRFEARFSLVEVTQSPSLLLQGMVGSQMPIAVSHGEGRVEV
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Template Sequence  . . . . GKPVLGICYGMQMMNKV. . . . . . . . FGGTVHKKSDG. . . . . VFNISV. DNTCSLFRGL. QKEEVVLLTHGD. . . . .
Template Known Secondary structure  ....SS
T........TT

B
S



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TTSGGGTT
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SB

S
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   97..100.........110... ......120.... .....130 .........140 .........150..
 
   1204.....1210.........1220.........1230.........1240.........1250.........1260..
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Query Sequence  RDAAHLAALESKGLVALRYVDNFGKVTETYPANPNGSPNGITAVTTESGRVTIMMPHPE
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Template Sequence  . . . . . . . . . . . . . . . . . . SVDKVADGFKVVARSGN. . . . IVAGIANESKKLYGAQFHPE
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BSS

TT
TT....TTTTSB
TT
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   156...160.........170.. .......180.........190..
 
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No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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Lawrence Kelley, Benjamin Jefferys 
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