 |
Job Description | P15254 | Confidence | 96.82% | Date | Thu Jan 5 11:34:41 GMT 2012 |
Rank | 102 | Aligned Residues | 98 |
% Identity | 20% | Template | c2vrnA_ |
PDB info |
PDB header:hydrolase | Chain: A: PDB Molecule:protease i; |
PDBTitle: the structure of the stress response protein dr1199 from2 deinococcus radiodurans: a member of the dj-1 superfamily
|
Resolution | 2.15 Å |
|
 |
  |   |
1038 | . | 1040 | . | . | . | . | . | . | . | . | . | 1050 | . | |
|
. | . | . | . | . | . | . | . | 1060 | . | . | . | . | . | . | . | . | . | 1070 | . | . | |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
. | . | . | . | . | . | . | 1080 | . | . | . | . | . | . | . | . | . | 1090 | . | . | . | . | . | . |
Predicted Secondary structure |   |
|
|
|  |  |  |  |  |  |
|
|
|
|
| . | . |
|  |  |  |  |  |  |  |  |  |  |
|
|
|  |  |  |  |  |  |  | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . |  |  |
|
|  |  |  |
|
|  |  |  |
|
|  |  |  |  |  |
|
|
|
|
|
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
. |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
A | R | P | K | V | A | V | L | R | E | Q | G | V | N | . |
. |
S | H | V | E | M | A | A | A | F | H | R | A | G | F | D | A | I | D | V | H | M | . |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
S | D | L | L | T | G | R | T | G | L | E | D | F | H | A | L | V | A | C | G | G | F | S | Y |
Query Conservation |   |
  |   |
|
|
|
|
|
|   |   |
|
|
|
| . | . |   |   |   |   |   |   |   |
|
|   |   |
|
|
|   |   |   |   |
|   |   | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . |   |
|
|   |   |   |   |   |   |
|   |   |
|   |
|
|   |   |   |
|
|
|
|   |
Alig confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . | . | . |
Template Conservation |   |
  |   |
|
|
|   |
|
|
|   |   |
|
|   |   |   |
|   |   |   |   |   |   |   |
|   |   |
|   |   |   |
|   |   |   |
|   |   |   |   |   |
|   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |
|   |
|   |
|   |
| . | . | . | . |
Template Sequence |   |
T | G | K | K | I | A | I | L | A | A | D | G | V | E | E | I | E | L | T | S | P | R | A | A | I | E | A | A | G | G | T | T | E | L | I | S | L | E | P | G | E | I | Q | S | M | K | G | D | I | E | P | Q | E | K | Y | R | V | D | H | V | V | S | E | V | Q | V | S | D | Y | D | G | L | L | L | P | G | . |
. |
. |
. |
Template Known Secondary structure |   |
T | T |
|  |  |  |  |  |
|
| T | T |
| B |  |  |  |  |  |  |  |  |  |  |  |  |  | T | T |
|  |  |  |  |  |  | S | S | S | S |  |  |  |  |  |  | T | T | T |  |  |  |  |  |  |  |
| S |  |  | G | G | G |
|
| G | G | G |
| S |  |  |  |  |
|
| . | . | . | . |
Template Predicted Secondary structure |   |
|
|
|  |  |  |  |  |  |
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|  |  |  |  |  |  |  |
|
|
|  |  |  |  |  |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|  |  |  |
|
|
|
|
|
|
|  |  |  |  |  |
| . | . | . | . |
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
8 | . | 10 | . | . | . | . | . | . | . | . | . | 20 | . | . | . | . | . | . | . | . | . | 30 | . | . | . | . | . | . | . | . | . | 40 | . | . | . | . | . | . | . | . | . | 50 | . | . | . | . | . | . | . | . | . | 60 | . | . | . | . | . | . | . | . | . | 70 | . | . | . | . | . | . | . | . | . | 80 | . | . | . | |
|
|
|
  |
  |   |
1097 | . | . | 1100 | . | . | . | . | . | . | . | . | . | 1110 | . | . | . | . | . | . | . | . | . | 1120 | . | . | . | . | . | . | . | . | . | 1130 | . | . | . | . | . | . | . | . | . | 1140 | . | . | . | . | . | . | . |
Predicted Secondary structure |   |
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |
|
|  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|  |  |  |  |  |
|  |  |  |  |  |  |  |  |
|
|
|
|
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
G | D | V | L | G | A | G | E | G | W | A | K | S | I | L | F | N | D | R | V | R | D | E | F | A | T | F | F | H | R | P | Q | T | L | A | L | G | V | C | N | G | C | Q | M | M | S | N | L | R | E | L |
Query Conservation |   |
|
|   |   |   |   |   |   |   |   |
|   |   |
|
|   |
|   |   |
|   |   |   |   |   |   |
|   |   |
|   |
|
|
|
|
|
|
|
|
|
|   |
|   |
|   |   |
|
|   |
|
Alig confidence |   |
. | . | . | . | . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Template Conservation |   |
. | . | . | . | . | . |
|   |   |   |   |   |   |
|   |   |   |   |   |
|   |   |
|   |   |   |   |   |   |   | . | . |   |   |   |   |
|   |   |   |
|
|   |   |
|
|   |
|
|
|
|
Template Sequence |   |
. |
. |
. |
. |
. |
. |
G | T | V | N | P | D | K | L | R | L | E | E | G | A | M | K | F | V | R | D | M | Y | D | A | . |
. |
G | K | P | I | A | A | I | H | G | P | W | S | L | S | E | T | G | I | A |
Template Known Secondary structure |   |
. | . | . | . | . | . |
| T |  |  |  |  |  |  | T | T |
|  |  |  |  |  |  |  |  |  |  |  |  | T | . | . | T |
|
|  |  |  |
|
| T | T |  |  |  |  |  | T | T | T | T |
Template Predicted Secondary structure |   |
. | . | . | . | . | . |
|
|
|
|  |  |  |  |
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |
| . | . |
|
|  |  |  |  |  |
|
|
|
|
|
|
|
|
|
|
|
|
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
|
|
|
|
|
|
84 | . | . | . | . | . | 90 | . | . | . | . | . | . | . | . | . | 100 | . | . | . | . | . | . | . | |
|
. | . | 110 | . | . | . | . | . | . | . | . | . | 120 | . | . | . | . | . | . |
  |
No model constructed - rank, confidence too low
Phyre is for academic use only
Please cite: Protein structure prediction on
the web: a case study using the Phyre server |
Kelley LA and Sternberg MJE. Nature Protocols
4, 363 - 371 (2009) [pdf] [Import into BibTeX] |
  |
|
|