Job Description P15254 Confidence 98.79% Date Thu Jan 5 11:34:41 GMT 2012 Rank 60 Aligned Residues 178 % Identity 22% Template c2ad5B_ PDB info PDB header:ligase Chain: B: PDB Molecule:ctp synthase; PDBTitle: mechanisms of feedback regulation and drug resistance of ctp2 synthetases: structure of the e. coli ctps/ctp complex at 2.8-3 angstrom resolution. Resolution 2.80 Å

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		1055	.	.	.	.	1060	.	.	.	.	.							.	.	.	.	1070	.	.	.	.	.	.	.		.	.	1080	.	.	.	.	.	.	.	.	.	1090	.	.	.	.	.	.	.	.	.	1100	.	.	.	.	.	.	.	.	.	1110	.	.	.	.	.	.	.	.	.	1120	.	.	.	.	.	.	.
Predicted Secondary structure													.	.	.	.	.	.													.
Query SS confidence													.	.	.	.	.	.													.
Query Sequence		E	M	A	A	A	F	H	R	A	G	F	.	.	.	.	.	.	D	A	I	D	V	H	M	S	D	L	L	T	.	G	R	T	G	L	E	D	F	H	A	L	V	A	C	G	G	F	S	Y	G	D	V	L	G	A	G	E	G	W	A	K	S	I	L	F	N	D	R	V	R	D	E	F	A	T	F	F	H	R	P
Query Conservation													.	.	.	.	.	.													.
Alig confidence													.	.	.	.	.	.													.																									.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																																																								.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		S	V	I	E	A	L	K	H	G	G	L	K	N	R	V	S	V	N	I	K	L	I	D	S	Q	D	V	E	T	R	G	V	E	I	L	K	G	L	D	A	I	L	V	P	G	G	F	G	Y	R	G	V	E	G	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	M	I	T	T	A	R	F	A	R	E	N
Template Known Secondary structure														T	T																		G	G	G	G	T	T		S										S	T	T				.	.	.	.	.	.	.	.	.	.	.	.	.	.	.											T
Template Predicted Secondary structure																																																								.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		307	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360																.	.	.	.	.	.	.	.	.	370	.
		1128	.	1130	.	.	.	.	.	.	.	.	.	1140	.	.	.							.	.	.	.	.	.	1150		.	.	.	.	.	.	.	.	.	1160	.	.	.	.	.	.	.	.															.	1170	.	.	.	.	.	.	.	.	.	1180	.	.	.	.	.	.
Predicted Secondary structure																		.	.	.	.	.	.								.																			.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																		.	.	.	.	.	.								.																			.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		Q	T	L	A	L	G	V	C	N	G	C	Q	M	M	S	N	.	.	.	.	.	.	L	R	E	L	I	P	G	.	S	E	L	W	P	R	F	V	R	N	T	S	D	R	F	E	A	R	.	.	.	.	.	.	.	.	.	.	.	.	.	.	F	S	L	V	E	V	T	Q	S	P	S	L	L	L	Q	G	M	V
Query Conservation																		.	.	.	.	.	.								.																			.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence																		.	.	.	.	.	.								.																			.	.	.	.	.	.	.	.	.	.	.	.	.	.							.
Template Conservation																																																																						.
Template Sequence		N	I	P	Y	L	G	I	C	L	G	M	Q	V	A	L	I	D	Y	A	R	H	V	A	N	M	E	N	A	N	S	T	E	F	V	P	D	C	K	Y	P	V	V	A	L	I	T	E	W	R	D	E	N	G	N	V	E	V	T	M	R	L	G	A	Q	Q	C	Q	L	.	V	D	D	S	L	V	R	Q	L	Y	N
Template Known Secondary structure		T							T														T	T			T	T			B	T	T	T		T	T		S			S				T	T	T				S	S	S																.		T	T								T
Template Predicted Secondary structure																																																																						.
Template SS confidence
		372	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420	.	.	.	.	.	.	.	.	.	430	.	.	.	.	.	.	.	.	.		440	.	.	.	.	.	.	.	.	.	450
		1187	.	.	1190	.	.	.	.	.	.	.	.	.	1200	.	.	.	.	.	.	.	.	.	1210	.	.	.	.	.	.	.	.	.	1220	.	.	.	.	.	.	.	.	.	1230	.	.	.	.	.	.	.	.	.	1240	.	.	.	.	.	.	.	.	.	1250	.	.	.		.	.	.	.	.	.	1260	.	.	.	.	.
Predicted Secondary structure																																																																					.
Query SS confidence																																																																					.
Query Sequence		G	S	Q	M	P	I	A	V	S	H	G	E	G	R	V	E	V	R	D	A	A	H	L	A	A	L	E	S	K	G	L	V	A	L	R	Y	V	D	N	F	G	K	V	T	E	T	Y	P	A	N	P	N	G	S	P	N	G	I	T	A	V	T	T	E	S	G	R	.	V	T	I	M	M	P	H	P	E	R	V	F
Query Conservation																																																																					.
Alig confidence												.	.	.			.																				.	.	.	.	.	.	.	.	.	.	.	.	.								.	.											.
Template Conservation												.	.	.			.																				.	.	.	.	.	.	.	.	.	.	.	.	.								.	.
Template Sequence		A	P	T	I	V	E	R	H	R	H	.	.	.	R	Y	.	E	V	N	N	M	L	L	K	Q	I	E	D	A	G	L	R	V	A	G	.	.	.	.	.	.	.	.	.	.	.	.	.	R	S	G	D	D	Q	L	.	.	V	E	I	I	E	V	P	N	H	P	W	F	V	A	C	Q	F	H	P	E	F	T	S
Template Known Secondary structure		S	S									.	.	.			.				G	G	G								T						.	.	.	.	.	.	.	.	.	.	.	.	.			T	T	T	T		.	.							T	T	S	S	S					S	S		G	G	G	G
Template Predicted Secondary structure												.	.	.			.																				.	.	.	.	.	.	.	.	.	.	.	.	.								.	.
Template SS confidence
		460	.	.	.	.	.	.	.	.	.				470	.		.	.	.	.	.	.	.	.	480	.	.	.	.	.	.	.	.	.	490														.	.	.	.	.	.	.			.	.	500	.	.	.	.	.	.	.	.	.	510	.	.	.	.	.	.	.	.	.	520
		1266	.
Predicted Secondary structure
Query SS confidence
Query Sequence		R	T
Query Conservation
Alig confidence
Template Conservation
Template Sequence		T	P
Template Known Secondary structure			T
Template Predicted Secondary structure
Template SS confidence
		521	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions