Job Description P15254 Confidence 98.70% Date Thu Jan 5 11:34:41 GMT 2012 Rank 62 Aligned Residues 213 % Identity 11% Template c1keeH_ PDB info PDB header:ligase Chain: H: PDB Molecule:carbamoyl-phosphate synthetase small chain; PDBTitle: inactivation of the amidotransferase activity of carbamoyl phosphate2 synthetase by the antibiotic acivicin Resolution 2.10 Å

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		990	.	.	.	.	.	.	.	.	.	1000	.	.	.	.	.	.	.	.	.	1010	.	.	.	.	.	.	.	.	.	1020	.	.	.	.	.	.	.	.	.	1030	.	.	.	.	.	.	.	.	.	1040	.	.	.	.	.	.	.	.	.	1050	.	.	.	.	.	.	.	.	.	1060	.	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		W	Q	M	Q	R	L	R	D	N	P	E	C	A	D	Q	E	H	Q	A	K	S	N	D	A	D	P	G	L	N	V	K	L	S	F	D	I	N	E	D	V	A	A	P	Y	I	A	T	G	A	R	P	K	V	A	V	L	R	E	Q	G	V	N	S	H	V	E	M	A	A	A	F	H	R	A	G	F	D	A	I	D
Query Conservation
Alig confidence																																																												.				.	.
Template Conservation																																																												.				.	.
Template Sequence		L	A	L	E	K	A	R	A	F	P	G	L	N	G	M	D	L	A	K	E	V	T	T	A	E	A	Y	S	W	T	Q	G	S	W	T	L	T	G	G	L	P	E	A	K	K	E	D	E	L	P	F	H	V	V	A	Y	D	F	.	G	A	K	.	.	R	N	I	L	R	M	L	V	D	R	G	C	R	L	T	I
Template Known Secondary structure													S	T	T		B						S		S	S										B	T	T	T	B	S						G	G	G		S								S	.	S			.	.										T	T
Template Predicted Secondary structure																																																												.				.	.
Template SS confidence
		142	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.		200	.	.			.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.
		1070	.	.	.	.	.	.	.	.	.	1080	.	.	.	.	.	.	.	.	.	1090	.	.	.	.	.	.	.	.	.	1100	.	.	.	.	.	.	.	.	.	1110	.	.	.	.	.	.	.	.	.	1120	.	.	.	.	.	.	.	.	.	1130	.	.	.	.	.	.	.	.	.	1140	.	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		V	H	M	S	D	L	L	T	G	R	T	G	L	E	D	F	H	A	L	V	A	C	G	G	F	S	Y	G	D	V	L	G	A	G	E	G	W	A	K	S	I	L	F	N	D	R	V	R	D	E	F	A	T	F	F	H	R	P	Q	T	L	A	L	G	V	C	N	G	C	Q	M	M	S	N	L	R	E	L	I	P
Query Conservation
Alig confidence															.											.	.	.	.	.	.						.	.	.	.	.	.	.																.									.									.	.	.	.	.
Template Conservation															.											.	.	.	.	.	.						.	.	.	.	.	.	.																.									.									.	.	.	.	.
Template Sequence		V	P	A	Q	T	S	A	E	D	V	L	K	M	.	N	P	D	G	I	F	L	S	N	G	.	.	.	.	.	.	P	G	D	P	A	.	.	.	.	.	.	.	P	C	D	Y	A	I	T	A	I	Q	K	F	L	E	T	.	D	I	P	V	F	G	I	L	.	G	H	Q	L	L	A	L	A	.	.	.	.	.
Template Known Secondary structure				T	T								T	T	.			S								.	.	.	.	.	.	S	B		S	T	.	.	.	.	.	.	.	T												T	T	S	.									.									.	.	.	.	.
Template Predicted Secondary structure															.											.	.	.	.	.	.						.	.	.	.	.	.	.																.									.									.	.	.	.	.
Template SS confidence
		219	220	.	.	.	.	.	.	.	.	.	230	.		.	.	.	.	.	.	.	.	240	.							.	.	.	.	.								.	.	.	250	.	.	.	.	.	.	.	.	.	260	.		.	.	.	.	.	.	.	.		270	.	.	.	.	.	.	.
		1150	.	.	.	.	.	.	.	.	.	1160	.	.	.	.	.	.	.	.	.	1170	.	.	.	.	.	.	.	.	.	1180	.	.	.	.	.	.	.	.	.	1190	.	.	.	.	.	.	.	.	.	1200	.	.	.	.	.	.	.	.	.	1210	.	.	.	.	.	.	.	.	.	1220	.	.	.	.	.	.
Predicted Secondary structure																																																																															.	.	.
Query SS confidence																																																																															.	.	.
Query Sequence		G	S	E	L	W	P	R	F	V	R	N	T	S	D	R	F	E	A	R	F	S	L	V	E	V	T	Q	S	P	S	L	L	L	Q	G	M	V	G	S	Q	M	P	I	A	V	S	H	G	E	G	R	V	E	V	R	D	A	A	H	L	A	A	L	E	S	K	G	L	V	A	L	R	Y	V	D	N	F	.	.	.
Query Conservation																																																																															.	.	.
Alig confidence		.	.	.														.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.								.									.	.	.	.	.	.	.	.	.	.	.	.	.	.	.										.	.	.
Template Conservation		.	.	.														.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.								.									.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		.	.	.	S	G	A	K	T	V	K	M	K	F	G	H	H	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	G	G	N	H	P	V	K	.	D	V	E	K	N	V	V	M	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	I	T	A	Q	N	H	G	F	A	V	D	E
Template Known Secondary structure		.	.	.		T												.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.								.		T	T	T	T				.	.	.	.	.	.	.	.	.	.	.	.	.	.	.												G
Template Predicted Secondary structure		.	.	.														.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.								.									.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
					279	280	.	.	.	.	.	.	.	.	.	290	.																						.	.	.	.	.	.	.		.	300	.	.	.	.	.	.																.	.	.	310	.	.	.	.	.	.	.	.
					1227	.	.	1230	.	.	.	.	.	.	.	.	.	1240	.	.	.	.	.	.	.	.	.	1250	.	.	.	.	.	.	.	.	.	1260	.	.	.	.	.	.	.	.
Predicted Secondary structure		.	.	.
Query SS confidence		.	.	.
Query Sequence		.	.	.	G	K	V	T	E	T	Y	P	A	N	P	N	G	S	P	N	G	I	T	A	V	T	T	E	S	G	R	V	T	I	M	M	P	H	P	E	R	V	F	R	T	V
Query Conservation		.	.	.
Alig confidence		.	.	.																.	.
Template Conservation																				.	.
Template Sequence		A	T	L	P	A	N	L	R	V	T	H	K	S	L	F	D	G	T	.	.	L	Q	G	I	H	R	T	D	K	P	A	F	S	F	Q	G	H	P	E	A	S	P	G	P	H
Template Known Secondary structure		G	G			T	T								T	T	T			.	.							S	S	S	S					S	S		T	T		S	S	S		G
Template Predicted Secondary structure																				.	.
Template SS confidence
		319	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.			.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions