Job Description P37675 Confidence 13.03% Date Thu Jan 5 11:56:49 GMT 2012 Rank 9 Aligned Residues 157 % Identity 4% Template c2xutC_ PDB info PDB header:transport protein Chain: C: PDB Molecule:proton/peptide symporter family protein; PDBTitle: crystal structure of a proton dependent oligopeptide (pot)2 family transporter. Resolution 3.62 Å

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		63	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.		.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.
Predicted Secondary structure																										.																																												.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																										.																																												.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		V	L	A	G	E	I	M	N	A	G	G	L	S	K	R	I	V	D	L	P	M	K	L	V	.	G	H	K	P	G	G	L	G	Y	V	G	V	L	A	A	M	I	M	A	S	L	S	G	S	A	V	A	D	T	A	A	V	A	A	L	L	V	P	M	M	R	S	A	.	.	.	.	.	.	.	.	.	.	.	.
Query Conservation																										.																																												.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence																										.																																												.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		D	V	F	H	S	F	V	I	G	V	Y	F	F	P	L	L	G	G	W	I	A	D	R	F	F	G	K	Y	N	T	I	L	W	L	S	L	I	Y	C	V	G	H	A	F	L	A	I	F	E	H	S	V	Q	G	F	Y	T	G	L	F	L	I	A	L	G	S	G	G	I	K	P	L	V	S	S	F	M	G	D	Q
Template Known Secondary structure														T									T	T	S	S		S																					T	S	S																		T	T											T
Template Predicted Secondary structure
Template SS confidence
		58	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.
				130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.
Predicted Secondary structure		.	.
Query SS confidence		.	.
Query Sequence		.	.	N	Y	P	V	N	R	A	A	G	L	I	A	S	G	G	I	I	A	P	I	I	P	P	S	I	P	F	I	I	F	G	V	S	S	G	L	S	I	S	K	L	F	M	A	G	I	A	P	G	M	M	M	G	A	T	L	M	L	T	W	W	W	Q	A	S	R	L	N	L	P	R	Q	Q	K	A	T	M	Q
Query Conservation		.	.
Alig confidence		.	.
Template Conservation
Template Sequence		F	D	Q	S	N	K	S	L	A	Q	K	A	F	D	M	F	Y	F	T	I	N	F	G	S	F	F	A	S	L	S	M	P	L	L	L	K	N	F	G	A	A	V	A	F	G	I	P	G	V	L	M	F	V	A	T	V	F	F	W	L	G	R	K	R	Y	I	H	M	P	V	E	G	K	G	N	I	G	L	V	L
Template Known Secondary structure			S	T	T	T	T	T																							T	S	T					T	S																						S	S	S	S	S							T	T
Template Predicted Secondary structure
Template SS confidence
		138	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.
		208	.	210	.	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		E	I	W	H	S	F	V	S	G	I	W	A
Query Conservation
Alig confidence
Template Conservation
Template Sequence		A	L	I	G	G	V	S	A	A	Y	A	L
Template Known Secondary structure												T	G
Template Predicted Secondary structure
Template SS confidence
		238	.	240	.	.	.	.	.	.	.	.	.

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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