 |
Job Description | P0AGL7 | Confidence | 39.69% | Date | Thu Jan 5 11:29:27 GMT 2012 |
Rank | 62 | Aligned Residues | 106 |
% Identity | 17% | Template | d3bbda1 |
SCOP info | alpha/beta knot
| alpha/beta knot
| EMG1/NEP1-like
|
Resolution | 2.15 |
|
 |
  |   |
126 | . | . | . | 130 | . | . | . | . | . | . | . | . | . | 140 | . | . | . | . | . | . | . | . | . | 150 | . | . | . | . | . | . | . | . | . | 160 | . | . | . | . | . | . | . | . | . | 170 | . | . | . | . | . | . | . | . | . | 180 | . | . | . | . | . | . | . | . | . | 190 | . | . | . | . | |
|
. | . | . | . | . | 200 | . | . | . |
Predicted Secondary structure |   |
 |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|
|
|
|  |  |
|
|
|
|
|  |  |  |  |  |  |
|
|
|
|
|  |  |  |  |  |
|
|
|
|
|
|
|
|  |  |
|
|
|
|
|
|
|  |  |  |  |  |
| . | . |
|
|
|
|
|
|  |  |  |
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
. |
|
|
|
|
|
|
|
|
|
Query Sequence |   |
K | K | L | Q | Q | W | Q | K | I | A | I | A | A | C | E | Q | C | G | R | N | R | V | P | E | I | R | P | A | M | D | L | E | A | W | C | A | E | Q | D | E | G | L | K | L | N | L | H | P | R | A | S | N | S | I | N | T | L | P | L | P | V | E | R | V | R | L | L | I | G | . |
. |
P | E | G | G | L | S | A | D | E |
Query Conservation |   |
  |
|   |
|
|   |   |   |
|   |   |
|
|   |
|
|
|   |
|   |   |
|
|   |
|   |   |   |   |   |
|   |   |   |
|   |   |   |   |   |   |   |   |
|   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |
|   |
|
|
|
| . | . |
|
|
|
|
|
|   |   |
|
Alig confidence |   |
|
|
|
|
|
|
|
| . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . |
|
|
|
|
|
|
|
|
| . | . |
|
|
|
|
|
|
|
|
|
Template Conservation |   |
|
|
|   |
|
|   |
| . |
|
|   |
|
|
|   |   |   |   |   |   |
|
|   |   |   | . |   |   |   |
|   |   |   |   |   |   |
|   |   |   |
|
|   |
|   |   |   |   |   |   |   |   |   |   |   |   |   | . | . |   |   |   |   |   |   |
|
|
|
|
|   |
|
|   |   |   |   |   |   |
Template Sequence |   |
R | N | Y | F | R | F | L | G | . |
V | X | E | K | V | L | K | G | E | R | N | H | L | I | K | X | E | . |
E | K | T | L | E | D | L | L | N | E | I | N | A | K | K | I | A | I | X | T | K | T | G | K | L | T | H | P | K | L | L | . |
. |
K | E | Y | D | T | F | I | I | G | G | F | P | Y | G | K | L | K | I | N | K |
Template Known Secondary structure |   |
S | S |  |  |  |  |  |  | . |  |  |  |  |  |  | T | T |
|
|
| S | S |  |  |  |  | . |  |
|
|  |  |  |  |  |  |  | T | T |
|
|  |  |  |  |  |  |  |  |  |  |  |
|
| G | G | G | G | . | . | G | G |
| S |  |  |  |  |  |
| S | S | S | S |
|
|
|
|
| G |
Template Predicted Secondary structure |   |
|
|  |  |  |  |  |  | . |  |  |  |  |  |  |
|
|
|
|  |  |  |  |  |  |
| . |
|
|
|  |  |  |  |  |
|
|
|
|
|
|  |  |  |  |  |
|
|
|
|
|
|
|
|  |  |  |
| . | . |
|
|
|
|  |  |  |  |  |  |  |
|
|
|
|
|
|
|  |  |
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
98 | . | 100 | . | . | . | . | . | |
. | . | . | . | 110 | . | . | . | . | . | . | . | . | . | 120 | . | . | |
. | . | . | . | . | . | . | 130 | . | . | . | . | . | . | . | . | . | 140 | . | . | . | . | . | . | . | . | . | 150 | . | . | . | |
|
. | . | . | . | . | . | 160 | . | . | . | . | . | . | . | . | . | 170 | . | . | . |
  |
  |   |
204 | . | . | . | . | . | 210 | . | . | . | . | . | . | . | . | . | 220 | . | . | . | . | . | . | . | . | . | 230 | . | . | . | . | . | . | . |
Predicted Secondary structure |   |
 |  |  |  |  |  |
|
|
|  |  |  |  |
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
I | A | M | T | A | R | Y | Q | F | T | D | I | L | L | G | P | R | V | L | R | T | E | T | T | A | L | T | A | I | T | A | L | Q | V |
Query Conservation |   |
|   |   |   |   |   |   |
|
|   |   |
|
|
|
|   |
|
|
|
|   |
|
|
|
|
|   |
|
|
|   |   |   |   |
Alig confidence |   |
|
|
|
|
|
| . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Template Conservation |   |
  |   |   |   |   |   | . | . |   |   |   |
|
|
|
|   |   |
|
|
|
|   |   |
|   |
|
|
|   |   |
|
|
|   |
Template Sequence |   |
E | K | V | F | G | D | . |
. |
I | K | E | I | S | I | Y | N | K | G | L | X | A | W | T | V | C | G | I | I | C | Y | S | L | S | F |
Template Known Secondary structure |   |
G | G |
| S | S |  | . | . |  |  |  |  |  | S | S | S | S |
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |
|
Template Predicted Secondary structure |   |
 |  |  |
|
|
| . | . |
|  |  |  |  |  |  |
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
174 | . | . | . | . | . | |
|
180 | . | . | . | . | . | . | . | . | . | 190 | . | . | . | . | . | . | . | . | . | 200 | . | . | . | . | . |
  |
No model constructed - rank, confidence too low
Phyre is for academic use only
Please cite: Protein structure prediction on
the web: a case study using the Phyre server |
Kelley LA and Sternberg MJE. Nature Protocols
4, 363 - 371 (2009) [pdf] [Import into BibTeX] |
  |
|
|