Return to main results Retrieve Phyre Job Id

Job DescriptionP0AGL7
Confidence44.60%DateThu Jan 5 11:29:27 GMT 2012
Rank57Aligned Residues129
% Identity16%Templated1i4na_
SCOP infoTIM beta/alpha-barrel Ribulose-phoshate binding barrel Tryptophan biosynthesis enzymes
Resolution2.50

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   93......100.........110.........120.........130.........140.........150.........160.........170..
Predicted Secondary structure 


























Query SS confidence 















































































Query Sequence  EFTIQKSIELGVSLITPLFSERCGVKLDSERLNKKLQQWQKIAIAACEQCGRNRVPEIRPAMDLEAWCAEQDEGLKLNLH
Query Conservation    

 






  
 
  



  
        
 

   
  

 


 
  

 
     
   
        
   
Alig confidence 






















............







.



































Template Conservation    

 

   


 



   
 ............ 
 
  
 .  
  


  



    
  

    
  




 
Template Sequence  TVQVKLASSVGADAILIIARILT. . . . . . . . . . . . AEQIKEIY. EAAEELGMDSLVEVHSREDLEKVFSVIRPKIIGINT
Template Known Secondary structure  TTT
SGGGS
.............TTT

STT


S
Template Predicted Secondary structure 







.............











Template SS confidence 















































































   114.....120.........130...... ...140.... .....150.........160.........170.........180
 
   173......180... ......190.........200.........210.........220.........230.......
Predicted Secondary structure 








........




















Query SS confidence 










. . . . . . . .





















































Query Sequence  PRASNSINTLP. . . . . . . . LPVERVRLLIGPEGGLSADEIAMTARYQFTDILLGPRVLRTETTALTAITALQV
Query Conservation             ........     
 









  

      

  



 



 




 


    
Alig confidence 










........










..










.




























Template Conservation 
 
 
          
   
     




..

   


  
.  










  
 

   
  
 
 
Template Sequence  RDLDTFEIKKNVLWELLPLVPDDTVVVAES. . GIKDPRELKDL. RGKVNAVLVGTSIMKAENPRRFLEEMRAW
Template Known Secondary structure  B
TTT

B
TTGGGS
TTSS..



GGG.TTT
S

SS
Template Predicted Secondary structure 













..



.






Template SS confidence 








































































   181........190.........200.........210 .........220. ........230.........240.........250
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions