Job Description P0AGL7 Confidence 100.00% Date Thu Jan 5 11:29:27 GMT 2012 Rank 3 Aligned Residues 232 % Identity 30% Template c3kw2A_ PDB info PDB header:transferase Chain: A: PDB Molecule:probable r-rna methyltransferase; PDBTitle: crystal structure of probable rrna-methyltransferase from2 porphyromonas gingivalis Resolution 2.00 Å

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		3	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		I	P	R	I	Y	H	P	E	P	L	T	S	H	S	H	I	A	L	C	E	D	A	A	N	H	I	G	R	V	L	R	M	G	P	G	Q	A	L	Q	L	F	D	G	S	N	Q	V	F	D	A	E	I	T	S	A	S	K	K	S	V	E	V	K	V	L	E	G	Q	I	D	D	R	E	S	P	L	H	I	H	L
Query Conservation
Alig confidence										.	.	.
Template Conservation										.	.	.
Template Sequence		L	P	L	F	Y	A	P	D	.	.	.	I	E	Q	S	D	R	L	P	D	D	E	A	G	H	I	L	R	V	L	R	X	Q	A	G	D	R	L	R	L	T	D	G	R	G	S	F	F	D	A	V	I	E	T	A	D	R	K	S	C	Y	V	S	V	C	G	Q	E	S	W	Q	K	P	W	R	D	R	I	T	I
Template Known Secondary structure								T	T	.	.	.	T	T	T		S	B											T	T	S				T	T								S	B	S												S	S															S	S		S
Template Predicted Secondary structure										.	.	.
Template SS confidence
		3	.	.	.	.	.	.	10				.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.
		83	.	.	.	.		.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.
Predicted Secondary structure							.
Query SS confidence							.
Query Sequence		G	Q	V	M	S	.	R	G	E	K	M	E	F	T	I	Q	K	S	I	E	L	G	V	S	L	I	T	P	L	F	S	E	R	C	G	V	K	L	D	S	E	R	L	N	K	K	L	Q	Q	W	Q	K	I	A	I	A	A	C	E	Q	C	G	R	N	R	V	P	E	I	R	P	A	M	D	L	E	A	W	C	A
Query Conservation							.
Alig confidence							.																													.	.	.	.	.	.
Template Conservation																																				.	.	.	.	.	.
Template Sequence		A	I	A	P	T	K	Q	S	E	R	X	E	W	X	L	E	K	L	V	E	I	G	V	D	E	V	V	F	I	E	S	E	H	S	.	.	.	.	.	.	E	R	R	R	I	K	A	E	R	L	E	R	I	A	I	S	A	X	K	Q	S	L	K	A	S	F	P	V	I	R	V	N	I	P	I	Q	T	V	I	A
Template Known Secondary structure							S	S																	S								T	T	S	.	.	.	.	.	.			S																		T	T		S	B
Template Predicted Secondary structure																																				.	.	.	.	.	.
Template SS confidence
		80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.							.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.
		162		.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.					.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.
Predicted Secondary structure			.																									.	.	.	.
Query SS confidence			.																									.	.	.	.
Query Sequence		E	.	Q	D	E	G	L	K	L	N	L	H	P	R	A	S	N	S	I	N	T	L	P	L	P	V	.	.	.	.	E	R	V	R	L	L	I	G	P	E	G	G	L	S	A	D	E	I	A	M	T	A	R	Y	Q	F	T	D	I	L	L	G	P	R	V	L	R	T	E	T	T	A	L	T	A	I	T	A	L	Q
Query Conservation			.																									.	.	.	.
Alig confidence			.																									.	.	.	.
Template Conservation
Template Sequence		D	T	P	K	A	A	V	R	L	I	A	Y	V	D	E	A	V	R	G	R	G	Y	P	S	D	F	Y	H	V	G	Q	D	V	L	I	L	I	G	P	E	G	D	F	S	P	S	E	V	E	S	A	L	L	A	G	F	A	P	V	S	L	G	E	S	R	L	R	T	E	T	A	G	L	V	A	C	Q	W	I	H
Template Known Secondary structure			S		T	T	S									T	T							G	G	G	T			T	T	S									T	T														T								S	S
Template Predicted Secondary structure
Template SS confidence
		154	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.
		237	.	.	240	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		V	R	F	G	D	L	G
Query Conservation
Alig confidence
Template Conservation
Template Sequence		T	L	Q	A	C	Y	R
Template Known Secondary structure							T
Template Predicted Secondary structure
Template SS confidence
		239	240	.	.	.	.	.

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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