Job Description P0AGL7 Confidence 88.49% Date Thu Jan 5 11:29:27 GMT 2012 Rank 27 Aligned Residues 142 % Identity 11% Template c3ilkB_ PDB info PDB header:structural genomics, unknown function Chain: B: PDB Molecule:uncharacterized trna/rrna methyltransferase hi0380; PDBTitle: the structure of a probable methylase family protein from haemophilus2 influenzae rd kw20 Resolution 2.01 Å

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		78	.	80	.	.	.	.	.	.	.	.		.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.
Predicted Secondary structure													.
Query SS confidence													.
Query Sequence		L	H	I	H	L	G	Q	V	M	S	R	.	G	E	K	M	E	F	T	I	Q	K	S	I	E	L	G	V	S	L	I	T	P	L	F	S	E	R	C	G	V	K	L	D	S	E	R	L	N	K	K	L	Q	Q	W	Q	K	I	A	I	A	A	C	E	Q	C	G	R	N	R	V	P	E	I	R	P	A	M	D	L
Query Conservation													.
Alig confidence													.																											.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.										.
Template Conservation																																								.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.										.
Template Sequence		E	N	I	R	I	V	L	I	E	T	S	H	S	G	N	I	G	S	A	A	R	A	X	K	T	X	G	L	T	Q	L	C	L	V	S	P	K	S	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	V	D	E	Q	S	Y	A	L	S	.	A	G	A	E	N	I	V	K	N	A	R	V	V	D	S	F
Template Known Secondary structure		G	G							S		S																T								S		S		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.		S								.	T	T							T					S	S
Template Predicted Secondary structure																																								.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.										.
Template SS confidence
		3	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40																	.	.	.	.	.	.	.	.	.		50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.
		157	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.									.	.	.	.	.	190	.	.	.	.	.	.	.		.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.
Predicted Secondary structure																														.	.	.	.	.	.	.	.														.
Query SS confidence																														.	.	.	.	.	.	.	.														.
Query Sequence		E	A	W	C	A	E	Q	D	E	G	L	K	L	N	L	H	P	R	A	S	N	S	I	N	T	L	P	L	.	.	.	.	.	.	.	.	P	V	E	R	V	R	L	L	I	G	P	E	G	.	G	L	S	A	D	E	I	A	M	T	A	R	Y	Q	F	T	D	I	L	L	G	P	R	V	L	R	T	E	T	T
Query Conservation																														.	.	.	.	.	.	.	.														.
Alig confidence																														.	.	.	.	.	.	.	.														.
Template Conservation
Template Sequence		D	E	A	V	D	D	C	S	L	V	I	G	T	S	A	R	L	R	H	L	Q	N	T	L	I	E	P	R	E	C	A	E	K	V	V	A	Y	K	G	K	I	A	I	V	F	G	R	E	R	I	G	L	T	N	E	E	L	L	K	C	H	Y	H	L	N	I	P	A	N	P	D	Y	S	S	L	N	L	A	X	A
Template Known Secondary structure					T	T	T		S										G	G	G	T	T	T																S								B	T	T	T	B							T	T		S									T	T	S
Template Predicted Secondary structure
Template SS confidence
		66	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.
		228	.	230	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		A	L	T	A	I	T	A	L	Q
Query Conservation
Alig confidence
Template Conservation
Template Sequence		V	Q	L	V	S	Y	E	L	R
Template Known Secondary structure
Template Predicted Secondary structure
Template SS confidence
		146	.	.	.	150	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions