Job Description P0AGL7 Confidence 100.00% Date Thu Jan 5 11:29:27 GMT 2012 Rank 5 Aligned Residues 216 % Identity 25% Template c1z85B_ PDB info PDB header:transferase Chain: B: PDB Molecule:hypothetical protein tm1380; PDBTitle: crystal structure of a predicted rna methyltransferase (tm1380) from2 thermotoga maritima msb8 at 2.12 a resolution Resolution 2.12 Å

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		4	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		P	R	I	Y	H	P	E	P	L	T	S	H	S	H	I	A	L	C	E	D	A	A	N	H	I	G	R	V	L	R	M	G	P	G	Q	A	L	Q	L	F	D	G	S	N	Q	V	F	D	A	E	I	T	S	A	S	K	K	S	V	E	V	K	V	L	E	G	Q	I	D	D	R	E	S	P	L	H	I	H	L	G
Query Conservation
Alig confidence									.	.																.
Template Conservation									.	.																.
Template Sequence		P	H	L	F	Y	G	T	.	.	A	Q	N	G	E	V	I	F	D	E	R	E	A	H	H	.	X	R	V	V	R	L	K	E	G	D	V	I	E	A	T	D	G	N	G	F	S	Y	T	C	I	L	K	S	L	K	K	K	T	A	A	A	K	I	V	K	V	E	E	K	E	K	E	P	T	E	K	L	S	V	V
Template Known Secondary structure									.	.			T	T												.				T	T			T	T								S	B	S												S	S																	S	S
Template Predicted Secondary structure									.	.																.
Template SS confidence
		2	.	.	.	.	.	.			.	10	.	.	.	.	.	.	.	.	.	20	.	.	.		.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.
		84	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		Q	V	M	S	R	G	E	K	M	E	F	T	I	Q	K	S	I	E	L	G	V	S	L	I	T	P	L	F	S	E	R	C	G	V	K	L	D	S	E	R	L	N	K	K	L	Q	Q	W	Q	K	I	A	I	A	A	C	E	Q	C	G	R	N	R	V	P	E	I	R	P	A	M	D	L	E	A	W	C	A	E	Q
Query Conservation
Alig confidence																																						.	.	.	.	.	.	.																																.	.	.	.	.	.
Template Conservation																																						.	.	.	.	.	.	.																																.	.	.	.	.	.
Template Sequence		V	P	I	G	R	W	E	R	T	R	F	L	I	E	K	C	V	E	L	G	V	D	E	I	F	F	H	K	F	E	R	S	Q	H	E	I	.	.	.	.	.	.	.	S	L	D	K	A	K	I	V	V	R	E	A	A	K	Q	C	K	R	Y	L	F	P	K	V	S	F	L	E	K	L	E	.	.	.	.	.	.
Template Known Secondary structure																				T	T		S								T	T						.	.	.	.	.	.	.																	T		S	B									S	S		.	.	.	.	.	.
Template Predicted Secondary structure																																						.	.	.	.	.	.	.																																.	.	.	.	.	.
Template SS confidence
		79	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.								.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.
		164	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		D	E	G	L	K	L	N	L	H	P	R	A	S	N	S	I	N	T	L	P	L	P	V	E	R	V	R	L	L	I	G	P	E	G	G	L	S	A	D	E	I	A	M	T	A	R	Y	Q	F	T	D	I	L	L	G	P	R	V	L	R	T	E	T	T	A	L	T	A	I	T	A	L	Q	V	R	F	G	D	L
Query Conservation
Alig confidence																								.																								.	.	.	.	.	.
Template Conservation																								.																								.	.	.	.	.	.
Template Sequence		F	S	G	N	V	I	T	L	D	L	D	A	S	Q	N	L	L	D	A	N	L	E	.	G	S	I	T	V	V	V	G	P	E	G	G	F	S	E	K	E	R	E	L	L	R	S	.	.	.	.	.	.	S	T	T	I	V	I	L	R	F	E	T	A	A	I	L	T	V	G	Y	I	A	L	K	K	Q	K	I
Template Known Secondary structure				S							T	T					T	T	T	S				.	S	S								T	T												T	.	.	.	.	.	.	T	S																						T	T
Template Predicted Secondary structure																								.																								.	.	.	.	.	.
Template SS confidence
		146	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.		.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190							.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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