Job Description P0AGL7 Confidence 100.00% Date Thu Jan 5 11:29:27 GMT 2012 Rank 1 Aligned Residues 233 % Identity 63% Template c1vhyB_ PDB info PDB header:structural genomics, unknown function Chain: B: PDB Molecule:hypothetical protein hi0303; PDBTitle: crystal structure of haemophilus influenzae protein hi0303, pfam2 duf558 Resolution 1.90 Å

Show / Hide SS confidence

Show / Hide Conservation and Alignment quality

		3	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		I	P	R	I	Y	H	P	E	P	L	T	S	H	S	H	I	A	L	C	E	D	A	A	N	H	I	G	R	V	L	R	M	G	P	G	Q	A	L	Q	L	F	D	G	S	N	Q	V	F	D	A	E	I	T	S	A	S	K	K	S	V	E	V	K	V	L	E	G	Q	I	D	D	R	E	S	P	L	H	I	H	L
Query Conservation
Alig confidence																																																							.	.	.	.	.	.															.	.
Template Conservation																																																							.	.	.	.	.	.															.	.
Template Sequence		I	P	R	I	Y	H	P	I	S	L	E	N	Q	T	Q	C	Y	L	S	E	D	A	A	N	H	V	A	R	V	L	R	X	T	E	G	E	Q	L	E	L	F	D	G	S	N	H	I	Y	P	A	K	I	I	.	.	.	.	.	.	V	K	V	E	I	L	G	R	E	L	A	D	K	E	.	.	S	H	L	K	I
Template Known Secondary structure								S	S			T	T		S													T	T	T	S				T	T								S	S	S									.	.	.	.	.	.															.	.		S	S
Template Predicted Secondary structure																																																							.	.	.	.	.	.															.	.
Template SS confidence
		3	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.							.	.	.	.	60	.	.	.	.	.	.	.	.	.			70	.	.	.	.
		83	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		G	Q	V	M	S	R	G	E	K	M	E	F	T	I	Q	K	S	I	E	L	G	V	S	L	I	T	P	L	F	S	E	R	C	G	V	K	L	D	S	E	R	L	N	K	K	L	Q	Q	W	Q	K	I	A	I	A	A	C	E	Q	C	G	R	N	R	V	P	E	I	R	P	A	M	D	L	E	A	W	C	A	E
Query Conservation
Alig confidence
Template Conservation
Template Sequence		H	L	G	Q	V	I	S	R	R	X	E	F	T	I	Q	K	S	V	E	L	G	V	N	V	I	T	P	L	W	S	E	R	C	G	V	K	L	D	A	E	R	X	D	K	K	I	Q	Q	W	Q	K	I	A	I	A	A	C	E	Q	C	G	R	N	I	V	P	E	I	R	P	L	X	K	L	Q	D	W	C	A	E
Template Known Secondary structure																					T	T										T	T	S						T	T	T	T																			T		S	S															T
Template Predicted Secondary structure
Template SS confidence
		81	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160
		163	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.		.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.
Predicted Secondary structure																										.
Query SS confidence																										.
Query Sequence		Q	D	E	G	L	K	L	N	L	H	P	R	A	S	N	S	I	N	T	L	P	L	P	V	.	E	R	V	R	L	L	I	G	P	E	G	G	L	S	A	D	E	I	A	M	T	A	R	Y	Q	F	T	D	I	L	L	G	P	R	V	L	R	T	E	T	T	A	L	T	A	I	T	A	L	Q	V	R	F	G	D
Query Conservation																										.
Alig confidence																										.
Template Conservation
Template Sequence		N	D	G	A	L	K	L	N	L	H	P	R	A	H	Y	S	I	K	T	L	P	T	I	P	A	G	G	V	R	L	L	I	G	S	E	G	G	L	S	A	Q	E	I	A	Q	T	E	Q	Q	G	F	T	E	I	L	L	G	K	R	V	L	R	T	E	T	A	S	L	A	A	I	S	A	L	Q	I	C	F	G	D
Template Known Secondary structure			S	S								T	T		S	B		T	T	T		S				T	T									T	T													T	T								S	S																				S	S
Template Predicted Secondary structure
Template SS confidence
		163	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.
		242	.
Predicted Secondary structure
Query SS confidence
Query Sequence		L	G
Query Conservation
Alig confidence
Template Conservation
Template Sequence		L	G
Template Known Secondary structure		T	T
Template Predicted Secondary structure
Template SS confidence
		243	.

---

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions