Job Description P0AE45 Confidence 99.66% Date Thu Jan 5 11:22:30 GMT 2012 Rank 65 Aligned Residues 175 % Identity 17% Template c2qlvF_ PDB info PDB header:transferase/protein binding Chain: F: PDB Molecule:nuclear protein snf4; PDBTitle: crystal structure of the heterotrimer core of the s.2 cerevisiae ampk homolog snf1 Resolution 2.60 Å

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		194	.	.	.	.	.	200	.	.	.	.	.	.	.		.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.
Predicted Secondary structure																.
Query SS confidence																.
Query Sequence		R	K	Q	E	H	E	L	I	E	N	V	F	E	L	.	E	S	R	T	V	P	S	S	M	T	P	R	E	N	V	I	W	F	D	L	H	E	D	E	Q	S	L	K	N	K	V	A	E	H	P	H	S	K	F	L	V	C	N	E	D	I	D	H	I	I	G	Y	V	D	S	K	D	L	L	N	R	V	L	A	N
Query Conservation																.
Alig confidence																.
Template Conservation
Template Sequence		S	I	E	Q	Q	L	A	V	E	S	I	R	K	F	L	N	S	K	T	S	Y	D	V	L	P	V	S	Y	R	L	I	V	L	D	T	S	L	L	V	K	K	S	L	N	V	L	L	Q	N	S	I	V	S	A	P	L	W	D	S	K	T	S	R	F	A	G	L	L	T	T	T	D	F	I	N	V	I	Q	Y	Y
Template Known Secondary structure																		T		B	G	G	G	G	S		S	S								T	T	S	B											T	T		S							T	T	T	T
Template Predicted Secondary structure
Template SS confidence
		12	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.
		273	.	.	.	.																			.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.
Predicted Secondary structure							.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence							.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		Q	S	L	A	L	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	N	S	G	V	Q	I	R	N	T	L	I	V	P	D	T	L	T	L	S	E	A	L	E	S	F	K	T	A	G	E	D	F	A	V	I	M	N	E	Y	A	L	V	V	G	I	I	T	L	N	D	V	M	T	T	L	M	G
Query Conservation							.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence							.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		F	S	N	P	D	K	F	E	L	V	D	K	L	Q	L	D	G	L	K	D	I	E	R	A	L	G	V	D	Q	L	D	T	A	S	I	H	P	S	R	P	L	F	E	A	C	L	K	M	L	E	S	R	S	G	R	I	P	L	I	D	Q	R	E	I	V	V	S	V	L	T	Q	Y	R	I	L	K	F	V	A	L
Template Known Secondary structure						S							S		B	S	T	T								S	S									B		T	T	S	B									T	T	S	T	T
Template Predicted Secondary structure
Template SS confidence
		92	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.
		335	.	.	.	.	340	.	.	.	.						.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.
Predicted Secondary structure												.	.	.	.	.
Query SS confidence												.	.	.	.	.
Query Sequence		D	L	V	G	Q	G	L	E	E	Q	.	.	.	.	.	I	V	A	R	D	E	N	S	W	L	I	D	G	G	T	P	I	D	D	V	M	R	V	L
Query Conservation												.	.	.	.	.
Alig confidence												.	.	.	.	.
Template Conservation
Template Sequence		N	C	R	E	T	H	F	L	K	I	P	I	G	D	L	N	I	I	T	Q	D	N	M	K	S	C	Q	M	T	T	P	V	I	D	V	I	Q	M	L
Template Known Secondary structure				G	G	G	G	G			S	B	G	G	G	T	T	T	S	B		S	S				B		T	T	S	B
Template Predicted Secondary structure
Template SS confidence
		177	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions