Return to main results Retrieve Phyre Job Id

Job DescriptionP69441
Confidence99.37%DateThu Jan 5 12:11:40 GMT 2012
Rank68Aligned Residues177
% Identity14%Templated1p5zb_
SCOP infoP-loop containing nucleoside triphosphate hydrolases P-loop containing nucleoside triphosphate hydrolases Nucleotide and nucleoside kinases
Resolution1.60

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   1........10.........20.........30.........40.........50.........60.........70......
Predicted Secondary structure 
























....
Query SS confidence 











































































. . . .
Query Sequence  MRIILLGAPGAGKGTQAQFIMEKYGIPQISTGDMLRAAVKSGSELGKQAKDIMDAGKLVTDELVIALVKERIAQED. . . .
Query Conservation 
 
 
 
  





 
  

  
    
    
 
                                        ....
Alig confidence 











































































....
Template Conservation 
 
 
 
  





    
   
                        
                               
Template Sequence  KKISIEGNIAAGKSTFVNILKQLCEDWEVVPEPVARWCNVQSTNGGNVLQMMYEKPERWSFTFQTYACLSRIRAQLASLN
Template Known Secondary structure 
STTSSTTTGGG
TT


TS








T
Template Predicted Secondary structure 
























Template SS confidence 















































































   22.......30.........40.........50.........60.........70.........80.........90.........100.
 
   77..80.........90. ........100.........110.........120....
Predicted Secondary structure  ......








..........................











Query SS confidence  . . . . . .














. . . . . . . . . . . . . . . . . . . . . . . . . .
































Query Sequence  . . . . . . CRNGFLLDGFPRTIP. . . . . . . . . . . . . . . . . . . . . . . . . . QADAMKEAGINVDYVLEFDVPDELIVDRIVGRR
Query Conservation  ......               ..........................    
         

           
   
 
Alig confidence  ......














..........................
































Template Conservation            
   
    
                                      


 
 
    
    
   
 
Template Sequence  GKLKDAEKPVLFFERSVYSDRYIFASNLYESECMNETEWTIYQDWHDWMNNQFGQSLELDGIIYLQATPETCLHRIYLRG
Template Known Secondary structure  SGGGGSSS
S
TTTSS


S


Template Predicted Secondary structure 




















Template SS confidence 















































































   114.....120.........130.........140.........150.........160.........170.........180.........190...
 
   125....130.........140.........150.........160.........170.........180.........190.. .....
Predicted Secondary structure 























.......
Query SS confidence 



































































. . . . . . .




Query Sequence  VHAPSGRVYHVKFNPPKVEGKDDVTGEELTTRKDDQEETVRKRLVEYHQMTAPLIGYYSKEAEAGNTK. . . . . . . YAKVD
Query Conservation                                            
   
      
              .......   

Alig confidence 



....................................



























.......




Template Conservation     
....................................          
   
                    
 


Template Sequence  RNEE. . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . QGIPLEYLEKLHYKHESWLLHRTLKTNFDYLQEVPILTLD
Template Known Secondary structure 
GGG....................................TT

TT




S
GGGGGS
Template Predicted Secondary structure 
....................................




Template SS confidence 















































































   194... ..200.........210.........220.........230.......
 
   198.200.........210...
Predicted Secondary structure 




Query SS confidence 















Query Sequence  GTKPVAEVRADLEKIL
Query Conservation       


   
   
Alig confidence 















Template Conservation       


   
   
Template Sequence  VNEDFKDKYESLVEKV
Template Known Secondary structure 

S
Template Predicted Secondary structure 



Template SS confidence 















   238.240.........250...
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions