Return to main results Retrieve Phyre Job Id

Job DescriptionP69441
Confidence99.86%DateThu Jan 5 12:11:40 GMT 2012
Rank20Aligned Residues171
% Identity46%Templated1akya1
SCOP infoP-loop containing nucleoside triphosphate hydrolases P-loop containing nucleoside triphosphate hydrolases Nucleotide and nucleoside kinases
Resolution1.63

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   1........10.........20.........30.........40.........50.........60.........70.........
Predicted Secondary structure 



























.
Query SS confidence 














































































.
Query Sequence  MRIILLGAPGAGKGTQAQFIMEKYGIPQISTGDMLRAAVKSGSELGKQAKDIMDAGKLVTDELVIALVKERIAQEDCRN.
Query Conservation 
 
 
 
  





 
  

  
    
    
 
                                           .
Alig confidence 














































































.
Template Conservation 
 
 
 
  






   

  
    
                                                   
Template Sequence  IRMVLIGPPGAGKGTQAPNLQERFHAAHLATGDMLRSQIAKGTQLGLEAKKIMDQGGLVSDDIMVNMIKDELTNNPACKN
Template Known Secondary structure 


TTSS

TT
TT




GGGGS
Template Predicted Secondary structure 

























Template SS confidence 















































































   5....10.........20.........30.........40.........50.........60.........70.........80....
 
   80.........90...... ...100.........110.........120.........130.........140.........150.....
Predicted Secondary structure 





....






























Query SS confidence 
















. . . .


























































Query Sequence  GFLLDGFPRTIPQADAM. . . . KEAGINVDYVLEFDVPDELIVDRIVGRRVHAPSGRVYHVKFNPPKVEGKDDVTGEELTT
Query Conservation                  
....         

           
   
                                
Alig confidence 
















....

























.................................
Template Conservation                                   
         
   .................................
Template Sequence  GFILDGFPRTIPQAEKLDQMLKEQGTPLEKAIELKVDDELLVARITN. . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . .
Template Known Secondary structure 
S


ST







.................................
Template Predicted Secondary structure 



















.................................
Template SS confidence 















































































   85....90.........100.........110.........120.........130.
 
   156...160.........170.........180.........190.........200.........210....
Predicted Secondary structure 











Query SS confidence 


























































Query Sequence  RKDDQEETVRKRLVEYHQMTAPLIGYYSKEAEAGNTKYAKVDGTKPVAEVRADLEKILG
Query Conservation             
   
      
                 

     


   
   

Alig confidence  .....

























.....






















Template Conservation  .....                          .....    

     


   
   
 
Template Sequence  . . . . . ADALKKRLAAYHAQTEPIVDFYKKTG. . . . . IWAGVDASQPPATVWADILNKLG
Template Known Secondary structure  .....TTT.....
TTS
T
Template Predicted Secondary structure  .....

.....





Template SS confidence 


























































   170.........180.........190..... ....200.........210........
 
Download:Text version FASTA pairwise alignment 3D Model in PDB format

View in Jmol

Send structure to FirstGlance for more viewing options


Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions