Job Description P69441 Confidence 99.38% Date Thu Jan 5 12:11:40 GMT 2012 Rank 66 Aligned Residues 166 % Identity 12% Template c3nwjB_ PDB info PDB header:transferase Chain: B: PDB Molecule:atsk2; PDBTitle: crystal structure of shikimate kinase from arabidopsis thaliana2 (atsk2) Resolution 2.35 Å

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		3	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		I	I	L	L	G	A	P	G	A	G	K	G	T	Q	A	Q	F	I	M	E	K	Y	G	I	P	Q	I	S	T	G	D	M	L	R	A	A	V	K	S	G	S	E	L	G	K	Q	A	K	D	I	M	D	A	G	K	L	V	T	D	E	L	V	I	A	L	V	K	E	R	I	A	Q	E	D	C	R	N	G	F	L
Query Conservation
Alig confidence																																																					.	.	.	.	.	.	.
Template Conservation																																																					.	.	.	.	.	.	.
Template Sequence		M	Y	L	V	G	M	M	G	S	G	K	T	T	V	G	K	I	M	A	R	S	L	G	Y	T	F	F	D	C	D	T	L	I	E	Q	A	M	K	G	T	S	V	A	E	I	F	E	H	F	G	E	.	.	.	.	.	.	.	S	V	F	R	E	K	E	T	E	A	L	K	K	L	S	L	M	Y	H	Q	V	V
Template Known Secondary structure							S	T	T	S														T															T	T													.	.	.	.	.	.	.																				S
Template Predicted Secondary structure																																																					.	.	.	.	.	.	.
Template SS confidence
		101	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.								.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.
		83	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		L	D	G	F	P	R	T	I	P	Q	A	D	A	M	K	E	A	G	I	N	V	D	Y	V	L	E	F	D	V	P	D	E	L	I	V	D	R	I	V	G	R	R	V	H	A	P	S	G	R	V	Y	H	V	K	F	N	P	P	K	V	E	G	K	D	D	V	T	G	E	E	L	T	T	R	K	D	D	Q	E	E
Query Conservation
Alig confidence																			.	.																								.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																			.	.																								.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		V	S	T	G	G	G	A	V	I	R	P	I	N	W	K	Y	M	.	.	H	K	G	I	S	I	W	L	D	V	P	L	E	A	L	A	H	R	I	T	Y	T	A	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	A	L
Template Known Secondary structure						G	G	G	G	S	S								.	.	T	T	S																					.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Predicted Secondary structure																			.	.																								.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		174	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190			.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.																																					.	.
		163	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		T	V	R	K	R	L	V	E	Y	H	Q	M	T	A	P	L	I	G	Y	Y	S	K	E	A	E	A	G	N	T	K	Y	A	K	V	D	G	T	K	P	V	A	E	V	R	A	D	L	E	K	I	L
Query Conservation
Alig confidence
Template Conservation
Template Sequence		N	R	L	S	T	I	W	D	A	R	G	E	A	Y	T	K	A	S	A	R	V	S	L	E	N	I	T	L	K	L	G	Y	R	S	V	S	D	L	T	P	A	E	I	A	I	E	A	F	E	Q	V
Template Known Secondary structure																T	T	S	S													T		S		G	G	G
Template Predicted Secondary structure
Template SS confidence
		234	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions