Job Description P69441 Confidence 99.42% Date Thu Jan 5 12:11:40 GMT 2012 Rank 60 Aligned Residues 174 % Identity 16% Template c3ld9D_ PDB info PDB header:transferase Chain: D: PDB Molecule:thymidylate kinase; PDBTitle: crystal structure of thymidylate kinase from ehrlichia chaffeensis at2 2.15a resolution Resolution 2.15 Å

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		1	.	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80
Predicted Secondary structure
Query SS confidence
Query Sequence		M	R	I	I	L	L	G	A	P	G	A	G	K	G	T	Q	A	Q	F	I	M	E	K	Y	G	I	P	Q	I	S	T	G	D	M	L	R	A	A	V	K	S	G	S	E	L	G	K	Q	A	K	D	I	M	D	A	G	K	L	V	T	D	E	L	V	I	A	L	V	K	E	R	I	A	Q	E	D	C	R	N	G
Query Conservation
Alig confidence																										.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																										.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		M	F	I	T	F	E	G	I	D	G	S	G	K	T	T	Q	S	H	L	L	A	E	Y	L	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	S	E	I	Y	G	V	N	N	V	V	L	T	R	E	P	G	G	T	L	L	N	E	S	V	R	N	L	L	F	K	A	Q	G	L	D	S	L	S	E
Template Known Secondary structure									S	T	T	S	S													.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.						G	G	G						S	S		S	S													S
Template Predicted Secondary structure																										.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		1	.	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.																		.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.
		81	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.			.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.
Predicted Secondary structure																																																											.	.
Query SS confidence																																																											.	.
Query Sequence		F	L	L	D	G	F	P	R	T	I	P	Q	A	D	A	M	K	E	A	G	I	N	V	D	Y	V	L	E	F	D	V	P	D	E	L	I	V	D	R	I	V	G	R	R	V	H	A	P	S	G	R	V	Y	H	V	K	F	.	.	N	P	P	K	V	E	G	K	D	D	V	T	G	E	E	L	T	T	R	K	D
Query Conservation																																																											.	.
Alig confidence																																																											.	.																				.	.
Template Conservation																																																																																.	.
Template Sequence		L	L	F	F	I	A	M	R	R	E	H	F	V	K	I	I	K	P	S	L	M	Q	K	K	I	V	I	C	D	R	F	I	D	S	T	I	A	Y	Q	G	Y	G	Q	G	I	D	C	S	L	I	D	Q	L	N	D	L	V	I	D	V	Y	P	D	I	T	F	I	I	D	V	D	D	M	E	F	Y	Y	R	.	.
Template Known Secondary structure																T							T	T							S										T	T	T	T																S				S																.	.
Template Predicted Secondary structure																																																																																.	.
Template SS confidence
		64	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.
		159	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		D	Q	E	E	T	V	R	K	R	L	V	E	Y	H	Q	M	T	A	P	L	I	G	Y	Y	S	K	E	A	E	A	G	N	T	K	Y	A	K	V	D	G	T	K	P	V	A	E	V	R	A	D	L	E	K	I	L
Query Conservation
Alig confidence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																							.
Template Conservation		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																							.
Template Sequence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	V	R	D	G	F	Y	D	I	A	K	K	N	P	H	R	C	H	V	I	T	T	Y	.	D	I	D	D	I	N	F	V	H	L	E	V	I
Template Known Secondary structure		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.													T	T	T								.	S	S
Template Predicted Secondary structure		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																							.
Template SS confidence
																					158	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.		180	.	.	.	.	.	.	.	.	.	190	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions