Return to main results Retrieve Phyre Job Id

Job DescriptionP69441
Confidence99.95%DateThu Jan 5 12:11:40 GMT 2012
Rank6Aligned Residues209
% Identity47%Templatec3akyA_
PDB info PDB header:adenylate kinaseChain: A: PDB Molecule:adenylate kinase; PDBTitle: stability, activity and structure of adenylate kinase2 mutants
Resolution2.23 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   1........10.........20.........30.........40.........50.........60.........70.........
Predicted Secondary structure 



























.
Query SS confidence 














































































.
Query Sequence  MRIILLGAPGAGKGTQAQFIMEKYGIPQISTGDMLRAAVKSGSELGKQAKDIMDAGKLVTDELVIALVKERIAQEDCRN.
Query Conservation 
 
 
 
  





 
  

  
    
    
 
                                           .
Alig confidence 














































































.
Template Conservation 
 
 
 
  







  

  
    
    
 
                                   
        
Template Sequence  IRMVLIGPPGAGKGTQAPNLQERFHAAHLATGDMLRSQIAKGTQLGLEAKKIMDQGGLVSDDIMVNMIKDELTNNPACKN
Template Known Secondary structure 


TTSS

TT
TTT




GGGGS
Template Predicted Secondary structure 
























Template SS confidence 















































































   5....10.........20.........30.........40.........50.........60.........70.........80....
 
   80.........90......... 100.........110.........120.........130.........140.........150.....
Predicted Secondary structure 






....





























Query SS confidence 



















. . . .























































Query Sequence  GFLLDGFPRTIPQADAMKEA. . . . GINVDYVLEFDVPDELIVDRIVGRRVHAPSGRVYHVKFNPPKVEGKDDVTGEELTT
Query Conservation                  
   ....      

           
   
                                
Alig confidence 



















....























































Template Conservation    
 
           
                          
   
                                
Template Sequence  GFILDGFPRTIPQAEKLDQMLKEQGTPLEKAIELKVDDELLVARITGRLIHPASGRSYHKIFNPPKEDMKDDVTGEALVQ
Template Known Secondary structure 
S


ST






TTT

TTTB

SSTTB
GGG

B
B
Template Predicted Secondary structure 































Template SS confidence 















































































   85....90.........100.........110.........120.........130.........140.........150.........160....
 
   156...160.........170.........180.........190.........200.........210....
Predicted Secondary structure 











Query SS confidence 


























































Query Sequence  RKDDQEETVRKRLVEYHQMTAPLIGYYSKEAEAGNTKYAKVDGTKPVAEVRADLEKILG
Query Conservation             
   
      
                 

     


   
   

Alig confidence 






























.....






















Template Conservation             
   
               .....    

     


   
   
 
Template Sequence  RSDDNADALKKRLAAYHAQTEPIVDFYKKTG. . . . . IWAGVDASQPPATVWADFLNKLG
Template Known Secondary structure 
TT
STTTTT.....
TTS
T
Template Predicted Secondary structure 




.....





Template SS confidence 


























































   165....170.........180.........190..... ....200.........210........
 
Download:Text version FASTA pairwise alignment 3D Model in PDB format

View in Jmol

Send structure to FirstGlance for more viewing options


Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions