 |
| Job Description | P69441 | | Confidence | 97.77% | Date | Thu Jan 5 12:11:40 GMT 2012 |
| Rank | 165 | Aligned Residues | 27 |
| % Identity | 30% | Template | c2zamA_ |
| PDB info |
PDB header:protein transport | Chain: A: PDB Molecule:vacuolar protein sorting-associating protein 4b; |
PDBTitle: crystal structure of mouse skd1/vps4b apo-form
|
| Resolution | 3.50 Å |
|
| | |
3 | . | . | . | . | . | . | 10 | . | . | . | . | . | . | . | . | . | 20 | . | . | . | . | . | . | . | . | . |
| Predicted Secondary structure | |
 | | |  |
|
|
|
|
|
|  | | | | | | | | | | | |
|
| | | |
| Query SS confidence | |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| Query Sequence | |
I | I | L | L | G | A | P | G | A | G | K | G | T | Q | A | Q | F | I | M | E | K | Y | G | I | P | Q | I |
| Query Conservation | |
| |
| |
| | |
|
|
|
|
|
| |
| | |
|
| | |
| | | | |
|
| Alig confidence | |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| Template Conservation | |
|
|
| |
|
|
|
|
|
|
|
| |
|
| |
|
|
| | | | | | | | |
| Template Sequence | |
I | L | L | F | G | P | P | G | T | G | K | S | Y | L | A | K | A | V | A | T | E | A | N | N | S | T | F |
| Template Known Secondary structure | |
| | | |
| S | T | T | S |
| | | | | | | | | | | | T | T | T |
| | |
| Template Predicted Secondary structure | |
| | | |
|
|
|
|
|
| | | | | | | | | | | | |
|
|
| | |
| Template SS confidence | |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| | |
170 | . | . | . | . | . | . | . | . | . | 180 | . | . | . | . | . | . | . | . | . | 190 | . | . | . | . | . | . |
| |
No model constructed - rank, confidence too low
Phyre is for academic use only
| Please cite: Protein structure prediction on
the web: a case study using the Phyre server |
| Kelley LA and Sternberg MJE. Nature Protocols
4, 363 - 371 (2009) [pdf] [Import into BibTeX] |
| |
|
|
|
