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Job DescriptionP69441
Confidence99.62%DateThu Jan 5 12:11:40 GMT 2012
Rank31Aligned Residues157
% Identity14%Templatec1zuiA_
PDB info PDB header:transferaseChain: A: PDB Molecule:shikimate kinase; PDBTitle: structural basis for shikimate-binding specificity of helicobacter2 pylori shikimate kinase
Resolution2.30 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   2.......10.........20.........30.........40.........50.........60.........70.........80.
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Query Sequence  RIILLGAPGAGKGTQAQFIMEKYGIPQISTGDMLRAAVKSGSELGKQAKDIMDAGKLVTDELVIALVKERIAQEDCRNGF
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Template Sequence  HLVLIGFMGSGKSSLAQELGLALKLEVLDTDMIISERVGLSVREIFEELGE. . . . . . . . DNFRMFEKNLIDELKTLKTPH
Template Known Secondary structure  S
TTS
T
TS

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   3......10.........20.........30.........40.........50... ......60.........70....
 
   82.......90.........100.........110.........120.........130.........140.........150.........160.
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Query Sequence  LLDGFPRTIPQADAMKEAGINVDYVLEFDVPDELIVDRIVGRRVHAPSGRVYHVKFNPPKVEGKDDVTGEELTTRKDDQE
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Template Sequence  VISTGGGIVM. . . . . HENLKGLGTTFYLKMDFETLIKRLNQREKRPL. . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . .
Template Known Secondary structure 

TTGGG.....
GGGTTS








GG.................................
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   75....80.... .....90.........100.........110......
 
   162.......170.........180.........190.........200.........210...
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Query Sequence  ETVRKRLVEYHQMTAPLIGYYSKEAEAGNTKYAKVDGTKPVAEVRADLEKIL
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Template Sequence  . . . LNNLTQAKELFEKRQALYEKNA. . . . . . SFIIDARGGLNNSLKQVLQFI
Template Known Secondary structure  ...GGS
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SS
T
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   119120.........130.........140 .........150.........160.
 
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No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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Lawrence Kelley, Benjamin Jefferys 
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