Job Description P06972 Confidence 46.19% Date Thu Jan 5 10:59:37 GMT 2012 Rank 4 Aligned Residues 335 % Identity 14% Template d1kpla_ SCOP info Clc chloride channel Clc chloride channel Clc chloride channel Resolution 3.00

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		142	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.
Predicted Secondary structure																																																																															.	.	.
Query SS confidence																																																																															.	.	.
Query Sequence		S	P	V	T	L	I	L	A	G	L	V	V	S	L	Y	C	G	A	I	N	Q	L	L	V	I	F	H	H	D	Q	L	Q	S	M	F	L	W	S	T	G	T	L	T	Q	T	D	W	G	G	V	E	R	L	W	P	Q	L	L	G	G	V	M	L	T	L	L	L	L	R	P	L	T	L	M	G	L	D	.	.	.
Query Conservation																																																																															.	.	.
Alig confidence																													.																																																		.	.	.
Template Conservation																													.
Template Sequence		T	P	L	A	I	L	F	M	A	A	V	V	G	T	L	T	G	L	V	G	V	A	F	E	K	A	V	.	S	W	V	Q	N	M	R	I	G	A	L	V	Q	V	A	D	H	A	F	L	L	W	P	L	A	F	I	L	S	A	L	L	A	M	V	G	Y	F	L	V	R	K	F	A	P	E	A	G	G	S	G	I
Template Known Secondary structure																													.										T	T	T	G	G	G	G																											T		G	G	G	S	B		S
Template Predicted Secondary structure																													.
Template SS confidence
		31	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.		.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.
			219	220	.	.	.	.	.	.	.	.						.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.		.	260	.	.	.	.	.	.	.	.	.	270	.	.	.			.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.
Predicted Secondary structure		.											.	.	.	.	.																															.																.	.
Query SS confidence		.											.	.	.	.	.																															.																.	.
Query Sequence		.	D	G	V	A	R	N	L	G	L	A	.	.	.	.	.	L	S	L	A	R	L	A	A	L	S	L	A	I	V	I	S	A	L	L	V	N	A	V	G	I	I	G	F	I	G	.	L	F	A	P	L	L	A	K	M	L	G	A	R	R	L	.	.	L	P	R	L	M	L	A	S	L	I	G	A	L	I	L	W
Query Conservation		.											.	.	.	.	.																															.																.	.
Alig confidence		.											.	.	.	.	.																															.																.	.
Template Conservation
Template Sequence		P	E	I	E	G	A	L	E	E	L	R	P	V	R	W	W	R	V	L	P	V	K	F	I	G	G	M	G	T	L	G	A	G	M	V	L	G	R	E	G	P	T	V	Q	I	G	G	N	L	G	R	M	V	L	D	V	F	R	M	R	S	A	E	A	R	H	T	L	L	A	T	G	A	A	A	G	L	S	A	A
Template Known Secondary structure									T	T	S	S																					T	T		S		B	S																		T	T	T
Template Predicted Secondary structure
Template SS confidence
		110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.
		290	.	.	.	.	.	.	.	.	.						300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.
Predicted Secondary structure												.	.	.	.	.
Query SS confidence												.	.	.	.	.
Query Sequence		L	S	D	Q	I	I	L	W	L	T	.	.	.	.	.	R	V	W	M	E	V	S	T	G	S	V	T	A	L	I	G	A	P	L	L	L	W	L	L	P	R	L	R	S	I	S	A	P	D	M	K	V	N	D	R	V	A	A	E	R	Q	H	V	L	A	F	A	L	A	G	G	V	L	L	L	M	A	V	V	V
Query Conservation												.	.	.	.	.
Alig confidence												.	.	.	.	.
Template Conservation
Template Sequence		F	N	A	P	L	A	G	I	L	F	I	I	E	E	M	R	P	Q	F	R	Y	N	L	I	S	I	K	A	V	F	T	G	V	I	M	S	S	I	V	F	R	I	F	N	G	E	A	P	I	I	E	V	G	K	L	S	D	A	P	V	N	T	L	W	L	Y	L	I	L	G	I	I	F	G	V	V	G	P	V	F
Template Known Secondary structure			T												T	T	S		T	T	S																										S			S	S
Template Predicted Secondary structure
Template SS confidence
		190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.
		365	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.												.	410	.	.	.	.	.	.	.	.	.	420	.	.	.	.	.	.	.	.	.	430	.	.	.
Predicted Secondary structure																																														.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																																														.	.	.	.	.	.	.	.	.	.	.
Query Sequence		A	L	S	F	G	R	D	A	H	G	W	T	W	A	S	G	A	L	L	E	D	L	M	P	W	R	W	P	R	I	M	A	A	L	F	A	G	V	M	L	A	V	A	G	.	.	.	.	.	.	.	.	.	.	.	C	I	I	Q	R	L	T	G	N	P	M	A	S	P	E	V	L	G	I	S	S	G	A	A	F
Query Conservation																																														.	.	.	.	.	.	.	.	.	.	.
Alig confidence						.	.	.	.	.	.	.																																		.	.	.	.	.	.	.	.	.	.	.
Template Conservation						.	.	.	.	.	.	.
Template Sequence		N	S	L	V	.	.	.	.	.	.	.	L	R	T	Q	D	M	F	Q	R	F	H	G	G	E	I	K	K	W	V	L	M	G	G	A	I	G	G	L	C	G	I	L	G	L	I	E	P	A	A	A	G	G	G	F	N	L	I	P	I	A	A	A	G	N	F	S	V	G	L	L	L	F	I	F	I	T	R	V	V
Template Known Secondary structure						.	.	.	.	.	.	.												T	T																						S	S	G	G	G	S	S	S	S	T	T	T						T	T
Template Predicted Secondary structure						.	.	.	.	.	.	.
Template SS confidence
		270	.	.	.								.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.
		434	.	.	.	.	.	440			.	.	.	.	.	.	.	.	.	450	.	.	.	.	.	.	.	.	.	460	.	.	.	.	.	.	.	.	.	470	.	.	.	.	.	.	.	.	.	480	.	.	.	.	.
Predicted Secondary structure									.	.
Query SS confidence									.	.
Query Sequence		G	V	V	L	M	L	F	.	.	L	V	P	G	N	A	F	G	W	L	L	P	A	G	S	L	G	A	A	V	T	L	L	I	I	M	I	A	A	G	R	G	G	F	S	P	H	R	M	L	L	A	G	M	A
Query Conservation									.	.
Alig confidence									.	.																																		.
Template Conservation																																												.
Template Sequence		T	T	L	L	C	F	S	S	G	A	P	G	G	I	F	A	P	M	L	A	L	G	T	L	L	G	T	A	F	G	M	A	A	A	V	L	F	P	Q	Y	H	L	.	E	A	G	T	F	A	I	A	G	M	G
Template Known Secondary structure										T		B	S	B	S																								G	G	G			.											T
Template Predicted Secondary structure																																												.
Template SS confidence
		343	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.		.	.	.	.	.	390	.	.	.	.	.

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions