Return to main results Retrieve Phyre Job Id

Job DescriptionP06972
Confidence18.60%DateThu Jan 5 10:59:37 GMT 2012
Rank10Aligned Residues41
% Identity20%Templatec2w5jM_
PDB info PDB header:hydrolaseChain: M: PDB Molecule:atp synthase c chain, chloroplastic; PDBTitle: structure of the c14-rotor ring of the proton translocating2 chloroplast atp synthase
Resolution3.80 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   74.....80.........90.... .....100.........110....
Predicted Secondary structure 







........
Query SS confidence 




















. . . . . . . .



















Query Sequence  LVGVLFQQVLRNPLAEPTTLG. . . . . . . . VATGAQLGITVTTLWAIPGA
Query Conservation   

   
 
 




 
 


........




 
             
Alig confidence 




















........



















Template Conservation      
 
 





    
   
 

 
  
   

 











Template Sequence  AAGQAVEGIARQPEAEGKIRGTLLLSLAFMEALTIYGLVVALALLFANP
Template Known Secondary structure 
GGGTTTTTS

Template Predicted Secondary structure 






Template SS confidence 
















































   31........40.........50.........60.........70.........
 
Download:Text version FASTA pairwise alignment 3D Model in PDB format

View in Jmol

Send structure to FirstGlance for more viewing options


Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions