Job Description P06972 Confidence 20.88% Date Thu Jan 5 10:59:37 GMT 2012 Rank 9 Aligned Residues 335 % Identity 12% Template c2ht2B_ PDB info PDB header:membrane protein Chain: B: PDB Molecule:h(+)/cl(-) exchange transporter clca; PDBTitle: structure of the escherichia coli clc chloride channel2 y445h mutant and fab complex Resolution 3.32 Å

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		138	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		G	K	R	L	S	P	V	T	L	I	L	A	G	L	V	V	S	L	Y	C	G	A	I	N	Q	L	L	V	I	F	H	H	D	Q	L	Q	S	M	F	L	W	S	T	G	T	L	T	Q	T	D	W	G	G	V	E	R	L	W	P	Q	L	L	G	G	V	M	L	T	L	L	L	L	R	P	L	T	L	M	G	L
Query Conservation
Alig confidence																																	.
Template Conservation																																	.
Template Sequence		E	R	D	K	T	P	L	A	I	L	F	M	A	A	V	V	G	T	L	V	G	L	A	A	V	A	F	D	K	G	V	.	A	W	L	Q	N	Q	R	M	G	A	L	V	H	T	A	D	N	Y	P	L	L	L	T	V	A	F	L	C	S	A	V	L	A	M	F	G	Y	F	L	V	R	K	Y	A	P	E	A	G
Template Known Secondary structure		T	T	T																													.														T		S																										T	T		G	G	G	S
Template Predicted Secondary structure																																	.
Template SS confidence
		27	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.		.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.
		218								.	220	.	.	.	.	.	.	.	.	.	230	.	.			.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.		.	260	.	.	.	.	.	.	.	.	.	270	.	.	.			.	.	.	.	.	.	280	.	.	.	.	.
Predicted Secondary structure			.	.	.	.	.	.	.															.	.																											.																.	.
Query SS confidence			.	.	.	.	.	.	.															.	.																											.																.	.
Query Sequence		D	.	.	.	.	.	.	.	D	G	V	A	R	N	L	G	L	A	L	S	L	A	.	.	R	L	A	A	L	S	L	A	I	V	I	S	A	L	L	V	N	A	V	G	I	I	G	F	I	G	.	L	F	A	P	L	L	A	K	M	L	G	A	R	R	L	.	.	L	P	R	L	M	L	A	S	L	I	G	A
Query Conservation			.	.	.	.	.	.	.															.	.																											.																.	.
Alig confidence			.	.	.	.	.	.	.															.	.																											.																.	.
Template Conservation
Template Sequence		G	S	G	I	P	E	I	E	G	A	L	E	D	Q	R	P	V	R	W	W	R	V	L	P	V	K	F	F	G	G	L	G	T	L	G	G	G	M	V	L	G	R	E	G	P	T	V	Q	I	G	G	N	I	G	R	M	V	L	D	I	F	R	L	K	G	D	E	A	R	H	T	L	L	A	T	G	A	A	A	G
Template Known Secondary structure		S		S									T	T		S																					T	T		S		B	S																			T	T			S
Template Predicted Secondary structure
Template SS confidence
		106	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.
		286	.	.	.	290	.	.	.	.	.	.	.	.	.										300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.
Predicted Secondary structure																.	.	.	.	.	.	.	.	.
Query SS confidence																.	.	.	.	.	.	.	.	.
Query Sequence		L	I	L	W	L	S	D	Q	I	I	L	W	L	T	.	.	.	.	.	.	.	.	.	R	V	W	M	E	V	S	T	G	S	V	T	A	L	I	G	A	P	L	L	L	W	L	L	P	R	L	R	S	I	S	A	P	D	M	K	V	N	D	R	V	A	A	E	R	Q	H	V	L	A	F	A	L	A	G	G	V
Query Conservation																.	.	.	.	.	.	.	.	.
Alig confidence																.	.	.	.	.	.	.	.	.																										.	.	.	.	.
Template Conservation																																																		.	.	.	.	.
Template Sequence		L	A	A	A	F	N	A	P	L	A	G	I	L	F	I	I	E	E	M	R	P	Q	F	R	Y	T	L	I	S	I	K	A	V	F	I	G	V	I	M	S	T	I	M	Y	R	I	F	N	.	.	.	.	.	H	E	V	A	L	I	D	V	G	K	L	S	D	A	P	L	N	T	L	W	L	Y	L	I	L	G	I
Template Known Secondary structure							T										T	T	T	T	S		S	S	S																									.	.	.	.	.	T	T			S											G	G	G
Template Predicted Secondary structure																																																		.	.	.	.	.
Template SS confidence
		186	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.						.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260
		357	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.												.	410	.	.	.	.	.	.	.	.	.	420	.	.	.	.	.
Predicted Secondary structure																																																						.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																																																						.	.	.	.	.	.	.	.	.	.	.
Query Sequence		L	L	L	M	A	V	V	V	A	L	S	F	G	R	D	A	H	G	W	T	W	A	S	G	A	L	L	E	D	L	M	P	W	R	W	P	R	I	M	A	A	L	F	A	G	V	M	L	A	V	A	G	.	.	.	.	.	.	.	.	.	.	.	C	I	I	Q	R	L	T	G	N	P	M	A	S	P	E	V	L
Query Conservation																																																						.	.	.	.	.	.	.	.	.	.	.
Alig confidence														.	.	.	.	.	.																																			.	.	.	.	.	.	.	.	.	.	.
Template Conservation														.	.	.	.	.	.
Template Sequence		I	F	G	I	F	G	P	I	F	N	K	W	.	.	.	.	.	.	V	L	G	M	Q	D	L	L	H	R	V	H	G	G	N	I	T	K	W	V	L	M	G	G	A	I	G	G	L	C	G	L	L	G	F	V	A	P	A	T	S	G	G	G	F	N	L	I	P	I	A	T	A	G	N	F	S	M	G	M	L	V
Template Known Secondary structure														.	.	.	.	.	.											T	T	T	T																								G	G	G	S	S		S	T	T							T	T		S
Template Predicted Secondary structure														.	.	.	.	.	.
Template SS confidence
		261	.	.	.	.	.	.	.	.	270	.	.							.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.
		426	.	.	.	430	.	.	.	.	.	.	.	.	.	440			.	.	.	.	.	.	.	.	.	450	.	.	.	.	.	.	.	.	.	460	.	.	.	.	.	.	.	.	.	470	.	.	.	.	.	.	.	.	.	480	.	.	.	.	.
Predicted Secondary structure																	.	.
Query SS confidence																	.	.
Query Sequence		G	I	S	S	G	A	A	F	G	V	V	L	M	L	F	.	.	L	V	P	G	N	A	F	G	W	L	L	P	A	G	S	L	G	A	A	V	T	L	L	I	I	M	I	A	A	G	R	G	G	F	S	P	H	R	M	L	L	A	G	M	A
Query Conservation																	.	.
Alig confidence																	.	.																																		.
Template Conservation																																																				.
Template Sequence		F	I	F	V	A	R	V	I	T	T	L	L	C	F	S	S	G	A	P	G	G	I	F	A	P	M	L	A	L	G	T	V	L	G	T	A	F	G	M	V	A	V	E	L	F	P	Q	Y	H	L	.	E	A	G	T	F	A	I	A	G	M	G
Template Known Secondary structure																	T	T		S	S	B	S																					T	T		G	G	G	T		.										T	T
Template Predicted Secondary structure																																																				.
Template SS confidence
		335	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.		.	.	.	.	.	390	.	.	.	.	.

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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