Job Description P06972 Confidence 15.28% Date Thu Jan 5 10:59:37 GMT 2012 Rank 14 Aligned Residues 218 % Identity 13% Template c2b2hA_ PDB info PDB header:transport protein Chain: A: PDB Molecule:ammonium transporter; PDBTitle: ammonium transporter amt-1 from a. fulgidus (as) Resolution 1.54 Å

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		310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		V	T	A	L	I	G	A	P	L	L	L	W	L	L	P	R	L	R	S	I	S	A	P	D	M	K	V	N	D	R	V	A	A	E	R	Q	H	V	L	A	F	A	L	A	G	G	V	L	L	L	M	A	V	V	V	A	L	S	F	G	R	D	A	H	G	W	T	W	A	S	G	A	L	L	E	D	L	M	P	W
Query Conservation
Alig confidence																					.	.	.	.	.	.	.	.	.	.																																						.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																					.	.	.	.	.	.	.	.	.	.																																						.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		I	S	S	G	F	A	A	L	A	V	A	M	T	I	G	K	R	A	G	.	.	.	.	.	.	.	.	.	.	F	E	E	Y	S	I	E	P	H	S	I	P	L	T	L	I	G	A	A	L	L	W	F	G	W	F	G	F	N	G	G	S	A	L	A	A	N	.	.	.	.	.	.	.	.	.	.	.	.	D	V
Template Known Secondary structure																			T	T	.	.	.	.	.	.	.	.	.	.	T	T	T	S					S																						G	G	G	S	S	S	S	.	.	.	.	.	.	.	.	.	.	.	.
Template Predicted Secondary structure																					.	.	.	.	.	.	.	.	.	.																																						.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		158	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.											.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.													.	.
		390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420	.	.	.	.	.	.	.	.	.	430	.	.	.	.	.	.	.	.	.	440	.	.	.	.	.	.	.	.	.	450	.	.	.	.	.	.	.	.	.	460	.	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		R	W	P	R	I	M	A	A	L	F	A	G	V	M	L	A	V	A	G	C	I	I	Q	R	L	T	G	N	P	M	A	S	P	E	V	L	G	I	S	S	G	A	A	F	G	V	V	L	M	L	F	L	V	P	G	N	A	F	G	W	L	L	P	A	G	S	L	G	A	A	V	T	L	L	I	I	M	I	A	A
Query Conservation
Alig confidence																														.	.	.	.
Template Conservation																														.	.	.	.
Template Sequence		A	I	N	A	V	V	V	T	N	T	S	A	A	V	A	G	F	V	W	M	V	I	G	W	I	K	G	K	.	.	.	.	P	G	S	L	G	I	V	S	G	A	I	A	G	L	A	A	I	T	P	A	A	G	F	V	D	V	K	G	A	I	V	I	G	L	V	A	G	I	V	C	Y	L	A	M	D	F	R	I
Template Known Secondary structure																												S		.	.	.	.																		T	T	T	T	T	T
Template Predicted Secondary structure																														.	.	.	.
Template SS confidence
		216	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.					.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.
		470	.	.	.	.	.	.	.	.	.	480	.	.	.	.	.	.	.	.	.	490	.	.	.	.	.	.	.	.	.	500	.	.	.	.	.	.	.	.	.	510	.	.	.	.	.	.	.	.	.	520	.	.	.	.	.	.	.	.	.	530	.	.	.	.	.	.								.	.	.	540	.	.
Predicted Secondary structure																																																																					.	.	.	.	.	.	.
Query SS confidence																																																																					.	.	.	.	.	.	.
Query Sequence		G	R	G	G	F	S	P	H	R	M	L	L	A	G	M	A	L	S	T	A	F	T	M	L	L	M	M	L	Q	A	S	G	D	P	R	M	A	Q	V	L	T	W	I	S	G	S	T	Y	N	A	T	D	A	Q	V	W	R	T	G	I	V	M	V	I	L	L	A	.	.	.	.	.	.	.	I	T	P	L	C	R
Query Conservation																																																																					.	.	.	.	.	.	.
Alig confidence												.	.	.	.																									.	.	.	.																										.	.	.	.	.	.	.
Template Conservation												.	.	.	.																									.	.	.	.
Template Sequence		K	K	K	I	D	E	S	L	D	A	.	.	.	.	W	A	I	H	G	I	G	G	L	W	G	S	V	A	V	G	I	L	A	N	P	E	V	N	.	.	.	.	G	Y	A	G	L	L	F	G	N	P	Q	L	L	V	S	Q	L	I	A	V	A	S	T	T	A	Y	A	F	L	V	T	L	I	L	A	K	A	V
Template Known Secondary structure			T	T				T	T			.	.	.	.																									.	.	.	.	S				G	G	G	T
Template Predicted Secondary structure												.	.	.	.																									.	.	.	.
Template SS confidence
		292	.	.	.	.	.	.	.	300	.					.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.					.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.
		543	.	.	.	.	.	.	550	.	.	.	.	.	.	.	.	.	560	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		R	W	L	T	I	L	P	L	G	G	D	T	A	R	A	V	G	M	A	L
Query Conservation
Alig confidence													.
Template Conservation													.
Template Sequence		D	A	A	V	G	L	R	V	S	S	Q	.	E	E	Y	V	G	L	D	L
Template Known Secondary structure					T		S	B					.
Template Predicted Secondary structure													.
Template SS confidence
		364	.	.	.	.	.	370	.	.	.	.		.	.	.	.	.	380	.	.

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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