Return to main results Retrieve Phyre Job Id

Job DescriptionP64476
Confidence5.74%DateThu Jan 5 12:08:44 GMT 2012
Rank21Aligned Residues8
% Identity38%Templatec2kgfA_
PDB info PDB header:viral proteinChain: A: PDB Molecule:capsid protein p27; PDBTitle: n-terminal domain of capsid protein from the mason-pfizer2 monkey virus
ResolutionUNK

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   22.......
Predicted Secondary structure 

Query SS confidence 







Query Sequence  LSPAQYLK
Query Conservation 






 
Alig confidence 







Template Conservation 

 

 

Template Sequence  LSGGDHLL
Template Known Secondary structure 

S
Template Predicted Secondary structure 

Template SS confidence 







   66...70...
 
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No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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Lawrence Kelley, Benjamin Jefferys 
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