Job Description P69808 Confidence 67.13% Date Thu Jan 5 12:12:03 GMT 2012 Rank 31 Aligned Residues 61 % Identity 23% Template c2zkiH_ PDB info PDB header:transcription Chain: H: PDB Molecule:199aa long hypothetical trp repressor binding PDBTitle: crystal structure of hypothetical trp repressor binding2 protein from sul folobus tokodaii (st0872) Resolution 2.90 Å

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		2	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.															.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.
Predicted Secondary structure																																																	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																																																	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		S	K	K	L	I	A	L	C	A	C	P	M	G	L	A	H	T	F	M	A	A	Q	A	L	E	E	A	A	V	E	A	G	Y	E	V	K	I	E	T	Q	G	A	D	G	I	Q	N	.	.	.	.	.	.	.	.	.	.	.	.	.	.	R	L	T	A	Q	D	I	A	E	A	T	I	I	I	H	S	V
Query Conservation																																																	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence												.				.	.																																.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation												.				.	.
Template Sequence		K	P	N	I	L	V	L	F	Y	G	.	Y	G	S	.	.	I	V	E	L	A	K	E	I	G	K	G	A	E	E	A	G	A	E	V	K	I	R	R	V	R	E	T	L	P	P	E	F	Q	S	R	I	P	F	D	K	V	K	D	I	P	E	V	T	L	D	D	M	R	W	A	D	G	F	A	I	G	S
Template Known Secondary structure												.	S	S		.	.																T												S		G	G	G		T	T			G	G	G	S	T	T	S		B										S
Template Predicted Secondary structure												.				.	.
Template SS confidence
		4	.	.	.	.	.	10	.	.	.		.	.	.			.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions