Job Description P0AEK0 Confidence 99.97% Date Thu Jan 5 11:23:32 GMT 2012 Rank 9 Aligned Residues 148 % Identity 16% Template d3b6oa1 SCOP info Ribonuclease H-like motif Ribonuclease H-like DnaQ-like 3'-5' exonuclease Resolution 2.10

Show / Hide SS confidence

Show / Hide Conservation and Alignment quality

		2	.	.	.	.	.	.	.	10	.	.	.				.	.	.	.	.	.	20	.	.	.	.	.	.																				.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.
Predicted Secondary structure														.	.	.														.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence														.	.	.														.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		L	R	I	I	D	T	E	T	C	G	L	Q	.	.	.	G	G	I	V	E	I	A	S	V	D	V	I	D	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	G	K	I	V	N	P	M	S	H	L	V	R	P	D	R	P	I	S	P	Q	A	M	A	I	H	R	I	T	E	A	M	V	A
Query Conservation														.	.	.														.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence														.	.	.														.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		L	I	F	L	D	L	E	A	T	G	L	P	S	S	R	P	E	V	T	E	L	C	L	L	A	V	H	R	R	A	L	E	N	T	S	I	S	Q	G	H	P	P	P	V	P	R	P	P	R	V	V	D	K	L	S	L	C	I	A	P	G	K	A	C	S	P	G	A	S	E	I	T	G	L	S	K	A	E	L	E
Template Known Secondary structure										S	S		G	G	G																			T	S					S	S	S								S	S											S	S
Template Predicted Secondary structure
Template SS confidence
		14	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.
		60	.	.							.	.	.	.	.	.	.	70	.	.	.	.	.						.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.												.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.
Predicted Secondary structure					.	.	.	.	.	.														.	.	.	.	.																					.	.	.	.	.	.	.	.	.	.	.
Query SS confidence					.	.	.	.	.	.														.	.	.	.	.																					.	.	.	.	.	.	.	.	.	.	.
Query Sequence		D	K	P	.	.	.	.	.	.	W	I	E	D	V	I	P	H	Y	Y	G	S	E	.	.	.	.	.	W	Y	V	A	H	N	A	S	F	D	R	R	V	L	P	E	M	P	G	E	.	.	.	.	.	.	.	.	.	.	.	W	I	C	T	M	K	L	A	R	R	L	W	P	G	I	K	Y	S	N	M	A	L
Query Conservation					.	.	.	.	.	.														.	.	.	.	.																					.	.	.	.	.	.	.	.	.	.	.
Alig confidence					.	.	.	.	.	.														.	.	.	.	.																					.	.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		V	Q	G	R	Q	R	F	D	D	N	L	A	I	L	L	R	A	F	L	Q	R	Q	P	Q	P	C	C	L	V	A	H	N	G	D	R	Y	D	F	P	L	L	Q	T	E	L	A	R	L	S	T	P	S	P	L	D	G	T	F	C	V	D	S	I	A	A	L	K	A	L	E	Q	A	K	S	Y	S	L	G	S	I
Template Known Secondary structure			T	T				S														T	S		S	S						T	T	T	T	T	T											T	S	S	S			T	T	T	T															T					S
Template Predicted Secondary structure
Template SS confidence
		94	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.
		118	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		Y	K	T	R	K	L	N	V	Q	T	P	P	G	L	H	H	H	R	A	L	Y	D	C	Y	I	T	A	A	L	L	I	D	I	M	N	T
Query Conservation
Alig confidence							.	.	.	.
Template Conservation							.	.	.	.
Template Sequence		Y	T	R	L	Y	.	.	.	.	W	Q	A	P	T	D	S	H	T	A	E	G	D	V	L	T	L	L	S	I	C	Q	W	K	P	Q	A
Template Known Secondary structure							.	.	.	.	S	S			S	S	T	T	S													T	S	S
Template Predicted Secondary structure							.	.	.	.
Template SS confidence
		183	.	.	.	.					.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.

---

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions