Job Description P0AEK0 Confidence 94.61% Date Thu Jan 5 11:23:32 GMT 2012 Rank 49 Aligned Residues 143 % Identity 15% Template d2hbka2 SCOP info Ribonuclease H-like motif Ribonuclease H-like DnaQ-like 3'-5' exonuclease Resolution 2.25

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		2	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.
Predicted Secondary structure
Query SS confidence
Query Sequence		L	R	I	I	D	T	E	T	C	G	L	Q	G	G	I	V	E	I	A	S	V	D	V	I	D	G	K	I	V	N	P	M	S	H	L	V	R	P	D	R	P	I	S	P	Q	A	M	A	I	H	R	I	T	E	A	M	V	A	D	K	P	W	I	E	D	V	I	P	H	Y	Y	G	S	E	W	Y	V	A	H	N
Query Conservation
Alig confidence																																								.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.													.	.
Template Conservation																																								.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.													.	.
Template Sequence		E	I	A	V	D	L	E	H	H	D	Y	R	S	Y	Y	G	I	V	C	L	M	Q	I	S	T	R	E	R	D	Y	L	V	D	T	L	K	L	R	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	E	N	L	H	I	L	N	E	V	F	T	N	.	.	P	S	I	V	K	V	F	H	G
Template Known Secondary structure												S	S	S	S	S											S	S							T	T	T	T	T	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	T	T	G	G	G	G					T		.	.	T	T	S					S	S
Template Predicted Secondary structure																																								.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.													.	.
Template SS confidence
		234	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.																				.	.	.	.	.	.	.	.	280	.	.	.			.	.	.	.	.	.	290	.	.
		82	.	.	.	.	.	.	.	90	.					.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.														.	.	.	.	140	.	.	.	.
Predicted Secondary structure												.	.	.	.																																													.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence												.	.	.	.																																													.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		A	S	F	D	R	R	V	L	P	E	.	.	.	.	M	P	G	E	W	I	C	T	M	K	L	A	R	R	L	W	P	G	I	K	Y	S	N	M	A	L	Y	K	T	R	K	L	N	V	Q	T	P	P	G	L	H	H	H	R	.	.	.	.	.	.	.	.	.	.	.	.	.	A	L	Y	D	C	Y	I	T	A
Query Conservation												.	.	.	.																																													.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence												.	.	.	.																.	.																												.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																															.	.
Template Sequence		A	F	M	D	I	I	W	L	Q	R	D	L	G	L	Y	V	V	G	L	F	D	T	Y	H	A	S	K	A	I	.	.	G	L	P	R	H	S	L	A	Y	L	L	E	N	F	A	N	F	K	T	S	K	K	Y	Q	L	A	D	W	R	I	R	P	L	S	K	P	M	T	A	A	A	R	A	D	T	H	F	L	L
Template Known Secondary structure																		S	S												.	.	T		S			S																T	T	T	T	S		T	T		S	S															T
Template Predicted Secondary structure																															.	.
Template SS confidence
		293	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.			.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370
		145	.	.	.	.	150	.	.	.	.	.	.	.			.	.	160	.	.	.	.	.	.	.
Predicted Secondary structure															.	.
Query SS confidence															.	.
Query Sequence		A	L	L	I	D	I	M	N	T	S	G	W	T	.	.	A	E	Q	M	A	D	I	T	G	R
Query Conservation															.	.
Alig confidence															.	.
Template Conservation
Template Sequence		N	I	Y	D	Q	L	R	N	K	L	I	E	S	N	K	L	A	G	V	L	Y	E	S	R	N
Template Known Secondary structure														T	T
Template Predicted Secondary structure
Template SS confidence
		371	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions