Return to main results Retrieve Phyre Job Id

Job DescriptionP0AEK0
Confidence99.97%DateThu Jan 5 11:23:32 GMT 2012
Rank10Aligned Residues148
% Identity20%Templated1wlja_
SCOP infoRibonuclease H-like motif Ribonuclease H-like DnaQ-like 3'-5' exonuclease
Resolution1.90

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   2.......10.... .....20.........30.........40.........50.........60....... ..70....
Predicted Secondary structure 






....

















...


Query SS confidence 












. . . .




















































. . .






Query Sequence  LRIIDTETCGLQG. . . . GIVEIASVDVIDGKIVNPMSHLVRPDRPISPQAMAIHRITEAMVADKPWIEDV. . . IPHYYGS
Query Conservation 




 




  .... 




 
 
    
      

 
   
      
 


   
   
   
 ...
      
Alig confidence 












....














...


































...






Template Conservation   
 

 




       
  
  
   
   ...    
 
   
      
 


                       
Template Sequence  VVAMDCEMVGLGPHRESGLARCSLVNVHGAVL. . . YDKFIRPEGEITDYRTRVSGVTPQHMVGATPFAVARLEILQLLKG
Template Known Secondary structure  TTTT
TT

...
SS





TT
TT
Template Predicted Secondary structure 













...


















Template SS confidence 















































































   7..10.........20.........30........ .40.........50.........60.........70.........80...
 
   75....80.........90...... ...100.........110.........120.........130.........140.........150..
Predicted Secondary structure 




.


















Query SS confidence 





















.























































Query Sequence  EWYVAHNASFDRRVLPEMPGEW. ICTMKLARRLWPGIKYSNMALYKTRKLNVQTPPGLHHHRALYDCYITAALLIDIMN
Query Conservation    




  

   
       .


  
     
      
                 

 

 

  

 
   
  
Alig confidence 





















.























































Template Conservation    

 

  

   
                          
  
        
      
 

 

  
  
      
Template Sequence  KLVVGHDLKHDFQALKEDMSGYTIYDTSTDRLLWREAKLVSLRVLSERLLHKSIQNSLLGHSSVEDARATMELYQISQR
Template Known Secondary structure  SSSTT


TT
GGG
T


T



S

TT


Template Predicted Secondary structure 

































Template SS confidence 














































































   84.....90.........100.........110.........120.........130.........140.........150.........160..
 
Download:Text version FASTA pairwise alignment 3D Model in PDB format

View in Jmol

Send structure to FirstGlance for more viewing options


Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions