Job Description P0AEK0 Confidence 92.96% Date Thu Jan 5 11:23:32 GMT 2012 Rank 50 Aligned Residues 125 % Identity 17% Template d1vk0a_ SCOP info Ribonuclease H-like motif Ribonuclease H-like DnaQ-like 3'-5' exonuclease Resolution 2.10

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		2	.	.	.	.	.	.								.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.
Predicted Secondary structure									.	.	.	.	.	.	.																																																																		.
Query SS confidence									.	.	.	.	.	.	.																																																																		.
Query Sequence		L	R	I	I	D	T	E	.	.	.	.	.	.	.	T	C	G	L	Q	G	G	I	V	E	I	A	S	V	D	V	I	D	G	K	I	V	N	P	M	S	H	L	V	R	P	D	R	P	I	S	P	Q	A	M	A	I	H	R	I	T	E	A	M	V	A	D	K	P	W	I	E	D	V	I	P	H	Y	Y	G	.
Query Conservation									.	.	.	.	.	.	.																																																																		.
Alig confidence									.	.	.	.	.	.	.													.	.	.	.							.	.															.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.							.
Template Conservation																												.	.	.	.							.	.															.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		A	V	I	F	D	V	Y	W	D	V	G	F	T	K	T	S	G	W	S	L	S	S	V	K	L	S	.	.	.	.	T	R	N	L	C	L	.	.	F	L	R	L	P	K	P	F	H	D	N	L	K	D	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	L	Y	R	F	F	A	S
Template Known Secondary structure															G	G	G	G										.	.	.	.		S	S				.	.						S	S			G	G	G			.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.						T
Template Predicted Secondary structure																												.	.	.	.							.	.															.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		48	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.					.	.	.	.	.	.			80	.	.	.	.	.	.	.	.	.	90	.	.	.																						.	.	.	.	.	.	100
			74	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.					.	.	.	.	.	.	.	.	100	.	.	.	.	.	.			.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.														.	.
Predicted Secondary structure		.																			.	.	.	.																.	.																										.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence		.																			.	.	.	.																.	.																										.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		.	S	E	W	Y	V	A	H	N	A	S	F	D	R	R	V	L	P	E	.	.	.	.	M	P	G	E	W	I	C	T	M	K	L	A	R	R	L	.	.	W	P	G	I	K	Y	S	N	M	A	L	Y	K	T	R	K	L	N	V	Q	T	P	P	G	L	.	.	.	.	.	.	.	.	.	.	.	.	.	H	H
Query Conservation		.																			.	.	.	.																.	.																										.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence		.																			.	.	.	.																.	.																										.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		K	F	V	T	F	V	G	V	Q	I	E	E	D	L	D	L	L	R	E	N	H	G	L	V	I	R	N	A	I	N	V	G	K	L	A	A	E	A	R	G	T	L	V	L	E	F	L	G	T	R	E	L	A	H	R	V	L	W	S	D	L	G	Q	L	D	S	I	E	A	K	W	E	K	A	G	P	E	E	Q	L
Template Known Secondary structure		S	S	S					S	S																	S	S													T		G	G	G	G	G																								T	G	G	G	S
Template Predicted Secondary structure
Template SS confidence
		107	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.
		134	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		H	R	A	L	Y	D	C	Y	I	T	A	A	L	L	I	D	I	M	N	T
Query Conservation
Alig confidence
Template Conservation
Template Sequence		E	A	A	A	I	E	G	W	L	I	V	N	V	W	D	Q	L	S	D	E
Template Known Secondary structure
Template Predicted Secondary structure
Template SS confidence
		187	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions