Job Description P0AEK0 Confidence 99.39% Date Thu Jan 5 11:23:32 GMT 2012 Rank 19 Aligned Residues 148 % Identity 9% Template d1uoca_ SCOP info Ribonuclease H-like motif Ribonuclease H-like CAF1-like ribonuclease Resolution 2.3

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		2	.	.	.	.	.	.	.	10	.	.	.	.	.															.	.	.	.	20	.	.	.	.	.	.	.	.	.								30	.	.	.	.	.	.	.	.	.	40	.		.	.	.	.	.	.	.	.	50				.	.	.	.	.	.
Predicted Secondary structure																.	.	.	.	.	.	.	.	.	.	.	.	.	.															.	.	.	.	.	.	.													.										.	.	.
Query SS confidence																.	.	.	.	.	.	.	.	.	.	.	.	.	.															.	.	.	.	.	.	.													.										.	.	.
Query Sequence		L	R	I	I	D	T	E	T	C	G	L	Q	G	G	.	.	.	.	.	.	.	.	.	.	.	.	.	.	I	V	E	I	A	S	V	D	V	I	D	G	K	I	.	.	.	.	.	.	.	V	N	P	M	S	H	L	V	R	P	D	R	.	P	I	S	P	Q	A	M	A	I	.	.	.	H	R	I	T	E	A
Query Conservation																.	.	.	.	.	.	.	.	.	.	.	.	.	.															.	.	.	.	.	.	.													.										.	.	.
Alig confidence																.	.	.	.	.	.	.	.	.	.	.	.	.	.															.	.	.	.	.	.	.													.										.	.	.
Template Conservation
Template Sequence		H	V	S	I	S	T	E	F	V	G	S	K	V	D	Y	H	Y	Q	T	M	R	A	N	V	D	F	L	N	P	I	Q	L	G	L	S	L	S	D	A	N	G	N	K	P	D	N	G	P	S	T	W	Q	F	N	F	E	F	D	P	K	K	E	I	M	S	T	E	S	L	E	L	L	R	K	S	G	I	N	F	E
Template Known Secondary structure																										T	T													T	T					S	S	S		S						B				T	T															T	T
Template Predicted Secondary structure
Template SS confidence
		40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.
		57	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.									.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.																					.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.
Predicted Secondary structure																		.	.	.	.	.	.	.	.																				.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																		.	.	.	.	.	.	.	.																				.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		M	V	A	D	K	P	W	I	E	D	V	I	P	H	Y	Y	.	.	.	.	.	.	.	.	G	S	E	W	Y	V	A	H	N	A	S	F	D	R	R	V	L	P	E	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	M	P	G	E	W	I	C	T	M	K	L	A	R	R	L	W	P
Query Conservation																		.	.	.	.	.	.	.	.																				.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence																		.	.	.	.	.	.	.	.																				.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		K	H	E	N	L	G	I	D	V	F	E	F	S	Q	L	L	M	D	S	G	L	M	M	D	D	S	V	T	W	I	T	Y	H	A	A	Y	D	L	G	F	L	I	N	I	L	M	N	D	S	M	P	N	N	K	E	D	F	E	W	W	V	H	Q	Y	M	P	N	F	Y	D	L	N	L	V	Y	K	I	I	Q	E
Template Known Secondary structure								B											T	S	S		S	S		T	T	S					S	S	T	T											T	T	S				S	S													S	S												T	T
Template Predicted Secondary structure
Template SS confidence
		130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.
		109	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		G	I	K	Y	S	N	M	A	L	Y	K	T	R	K	L	N	V	Q	T	P	P	G	L	H	H	H	R	A	L	Y	D	C	Y	I	T	A	A	L	L	I	D	I	M	N
Query Conservation
Alig confidence																	.	.	.
Template Conservation																	.	.	.
Template Sequence		F	K	N	Q	Y	S	L	T	T	L	A	D	E	L	G	.	.	.	L	P	R	F	S	I	F	T	T	T	G	G	Q	S	L	L	M	L	L	S	F	C	Q	L	S	K
Template Known Secondary structure		T					S								T	T	.	.	.					G	G	G	G	S
Template Predicted Secondary structure																	.	.	.
Template SS confidence
		210	.	.	.	.	.	.	.	.	.	220	.	.	.	.				.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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