Job Description P0AEK0 Confidence 96.44% Date Thu Jan 5 11:23:32 GMT 2012 Rank 47 Aligned Residues 158 % Identity 15% Template d1s5ja1 SCOP info Ribonuclease H-like motif Ribonuclease H-like DnaQ-like 3'-5' exonuclease Resolution 2.40

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		2	.	.	.	.	.	.	.	10	.	.	.	.												.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70
Predicted Secondary structure															.	.	.	.	.	.	.	.	.	.	.
Query SS confidence															.	.	.	.	.	.	.	.	.	.	.
Query Sequence		L	R	I	I	D	T	E	T	C	G	L	Q	G	.	.	.	.	.	.	.	.	.	.	.	G	I	V	E	I	A	S	V	D	V	I	D	G	K	I	V	N	P	M	S	H	L	V	R	P	D	R	P	I	S	P	Q	A	M	A	I	H	R	I	T	E	A	M	V	A	D	K	P	W	I	E	D	V	I	P	H
Query Conservation															.	.	.	.	.	.	.	.	.	.	.
Alig confidence															.	.	.	.	.	.	.	.	.	.	.																															.	.	.	.	.	.	.	.
Template Conservation																																																								.	.	.	.	.	.	.	.
Template Sequence		R	V	A	I	D	I	E	V	Y	T	P	V	K	G	R	I	P	D	S	Q	K	A	E	F	P	I	I	S	I	A	L	A	G	S	D	G	L	K	K	V	L	V	L	N	R	N	D	V	N	E	G	S	V	K	.	.	.	.	.	.	.	.	L	D	G	I	S	V	E	R	F	N	T	E	Y	E	L	L	G	R
Template Known Secondary structure												S	S	S	S					T	T	T			S										T	T	S									S	S									.	.	.	.	.	.	.	.		T	T							S	S
Template Predicted Secondary structure																																																								.	.	.	.	.	.	.	.
Template SS confidence
		227	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280									.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.
		71	.					.	.	.	.	.	.	.	80	.	.		.	.	.	.	.	.	.	90	.																																.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.
Predicted Secondary structure				.	.	.	.											.										.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence				.	.	.	.											.										.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		Y	Y	.	.	.	.	G	S	E	W	Y	V	A	H	N	A	.	S	F	D	R	R	V	L	P	E	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	M	P	G	E	W	I	C	T	M	K	L	A	R	R	L	W	P	G	I	K	Y	S	N
Query Conservation				.	.	.	.											.										.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence				.	.	.	.											.										.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		F	F	D	I	L	L	E	Y	P	I	V	L	T	F	N	G	D	D	F	D	L	P	Y	I	Y	F	R	A	L	K	L	G	Y	F	P	E	E	I	P	I	D	V	A	G	K	D	E	A	K	Y	L	A	G	L	H	I	D	L	Y	K	F	F	F	N	K	A	V	R	N	Y	A	F	E	G	K	Y	N	E	Y	N
Template Known Secondary structure							T	T		S					S	S	T	T	T	T											T	T	T			G	G	G		S					S	T	T					T	T	S										T	S							T	S	T	T			S	S		S
Template Predicted Secondary structure
Template SS confidence
		299	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.
		115	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.										.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.
Predicted Secondary structure																							.	.	.	.	.	.	.	.	.
Query SS confidence																							.	.	.	.	.	.	.	.	.
Query Sequence		M	A	L	Y	K	T	R	K	L	N	V	Q	T	P	P	G	L	H	H	H	R	.	.	.	.	.	.	.	.	.	A	L	Y	D	C	Y	I	T	A	A	L	L	I	D	I	M	N	T	S	G	W	T	A	E	Q	M	A	D	I	T	G	R	P
Query Conservation																							.	.	.	.	.	.	.	.	.
Alig confidence													.										.	.	.	.	.	.	.	.	.
Template Conservation													.
Template Sequence		L	D	A	V	A	K	A	L	L	G	T	.	S	K	V	D	T	L	I	S	F	L	D	V	E	K	L	I	E	Y	N	F	R	D	A	E	I	T	L	Q	L	T	T	F	N	N	D	L	T	M	K	L	I	V	L	F	S	R	I	S	R	L	G
Template Known Secondary structure													.				S	S		T	T	T																				T	T	T
Template Predicted Secondary structure													.
Template SS confidence
		379	380	.	.	.	.	.	.	.	.	.		390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420	.	.	.	.	.	.	.	.	.	430	.	.	.	.	.	.	.	.	.	440

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions