Job Description P0AEK0 Confidence 96.44% Date Thu Jan 5 11:23:32 GMT 2012 Rank 48 Aligned Residues 81 % Identity 16% Template c4ktqA_ PDB info PDB header:transferase/dna Chain: A: PDB Molecule:protein (large fragment of dna polymerase i); PDBTitle: binary complex of the large fragment of dna polymerase i2 from t. aquaticus bound to a primer/template dna Resolution 2.50 Å

Show / Hide SS confidence

Show / Hide Conservation and Alignment quality

		78	.	80	.	.	.	.	.	.	.	.	.	90	.					.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.
Predicted Secondary structure																.	.	.	.
Query SS confidence																.	.	.	.
Query Sequence		V	A	H	N	A	S	F	D	R	R	V	L	P	E	.	.	.	.	M	P	G	E	W	I	C	T	M	K	L	A	R	R	L	W	P	G	I	K	Y	S	N	M	A	L	Y	K	T	R	K	L	N	V	Q	T	P	P	G	L	H	H	H	R	A	L	Y	D	C	Y	I	T	A	A	L	L	I	D	I	M	N	T
Query Conservation																.	.	.	.
Alig confidence																.	.	.	.																			.	.																			.	.	.	.	.	.
Template Conservation																																						.	.																			.	.	.	.	.	.
Template Sequence		A	R	G	L	L	A	K	D	L	S	V	L	A	L	R	E	G	L	G	L	P	P	G	D	D	P	M	L	L	A	Y	L	L	D	P	S	.	.	N	T	T	P	E	G	V	A	R	R	Y	G	G	E	W	T	E	E	.	.	.	.	.	.	A	G	E	R	A	A	L	S	E	R	L	F	A	N	L	W	G	R
Template Known Secondary structure		B		S	T	T											T	T					B													T	T	.	.												S					S		.	.	.	.	.	.	T	T	T	T
Template Predicted Secondary structure																																						.	.																			.	.	.	.	.	.
Template SS confidence
		348	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.			.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.							.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.
		154	.	.	.	.	.	160	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		S	G	W	T	A	E	Q	M	A	D	I	T	G
Query Conservation
Alig confidence
Template Conservation
Template Sequence		L	E	G	E	E	R	L	L	W	L	Y	R	E
Template Known Secondary structure		T	T	T
Template Predicted Secondary structure
Template SS confidence
		420	.	.	.	.	.	.	.	.	.	430	.	.

No model constructed - rank, confidence too low

---

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions