Job Description P0AEK0 Confidence 68.92% Date Thu Jan 5 11:23:32 GMT 2012 Rank 54 Aligned Residues 134 % Identity 20% Template c3mx2A_ PDB info PDB header:nuclear protein Chain: A: PDB Molecule:nucleoprotein; PDBTitle: lassa fever virus nucleoprotein complexed with dttp Resolution 1.98 Å

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		3	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40			.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.			.	.	.	.	.	.	70	.	.	.	.	.	.	.	.
Predicted Secondary structure																																								.	.																								.	.
Query SS confidence																																								.	.																								.	.
Query Sequence		R	I	I	D	T	E	T	C	G	L	Q	G	G	I	V	E	I	A	S	V	D	V	I	D	G	K	I	V	N	P	M	S	H	L	V	R	P	D	.	.	R	P	I	S	P	Q	A	M	A	I	H	R	I	T	E	A	M	V	A	D	K	P	W	.	.	I	E	D	V	I	P	H	Y	Y	G	S	E	W	Y	V
Query Conservation																																								.	.																								.	.
Alig confidence													.	.															.	.	.									.	.																								.	.
Template Conservation													.	.															.	.	.
Template Sequence		T	W	M	D	I	E	G	R	P	E	D	.	.	P	V	E	I	A	L	Y	Q	P	S	S	G	C	Y	.	.	.	I	H	F	F	R	E	P	T	D	L	K	Q	F	K	Q	D	A	K	Y	S	H	G	I	D	V	T	D	L	F	A	T	Q	P	G	L	T	S	A	V	I	D	A	L	P	R	N	M	V	I	T
Template Known Secondary structure								S		T	T	S	.	.		S							T	T	T	T			.	.	.								S												T	T		B		G	G	G	G	T	T	B		T	T									S		T	T
Template Predicted Secondary structure													.	.															.	.	.
Template SS confidence
		386	.	.	.	390	.	.	.	.	.	.			.	.	.	400	.	.	.	.	.	.	.	.	.	410				.	.	.	.	.	.	.	.	.	420	.	.	.	.	.	.	.	.	.	430	.	.	.	.	.	.	.	.	.	440	.	.	.	.	.	.	.	.	.	450	.	.	.	.	.	.	.	.	.	460
		79	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.								.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.		.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.
Predicted Secondary structure																			.	.	.	.	.	.	.																											.
Query SS confidence																			.	.	.	.	.	.	.																											.
Query Sequence		A	H	N	A	S	F	D	R	R	V	L	P	E	M	P	G	E	.	.	.	.	.	.	.	W	I	C	T	M	K	L	A	R	R	L	W	P	G	I	K	Y	S	N	M	A	L	Y	K	T	R	.	K	L	N	V	Q	T	P	P	G	L	H	H	H	R	A	L	Y	D	C	Y	I
Query Conservation																			.	.	.	.	.	.	.																											.
Alig confidence							.												.	.	.	.	.	.	.																											.
Template Conservation							.
Template Sequence		C	Q	G	S	D	.	D	I	R	K	L	L	E	S	Q	G	R	K	D	I	K	L	I	D	I	A	L	S	K	T	D	S	R	K	Y	E	N	A	V	W	D	Q	Y	K	D	L	C	H	M	H	T	G	V	V	V	E	K	K	E	E	I	T	P	H	C	A	L	M	D	C	I	M
Template Known Secondary structure			S		S		.									T	T			S														T	T	T									G	G	G				B		S
Template Predicted Secondary structure							.
Template SS confidence
		461	.	.	.	.		.	.	.	.	470	.	.	.	.	.	.	.	.	.	480	.	.	.	.	.	.	.	.	.	490	.	.	.	.	.	.	.	.	.	500	.	.	.	.	.	.	.	.	.	510	.	.	.	.	.	.	.	.	.	520	.	.	.	.	.	.	.	.	.	530	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions