|   |
2 | . | . | . | . | . | . | . | 10 | . | . | . | |
|
|
|
|
|
|
|
. | . | . | . | . | . | 20 | . | . | . | . | . | . | . | |
|
. | . | 30 | . | . | . | . | . | . | . | . | . | 40 | . | . | . | . | . | . | . | . | . | 50 | . | . | . | . | . | . | . | . | . | 60 | . | . | . | . | . | . | . | . | . | 70 | . |
Predicted Secondary structure |   |
 |  |  |  |  |  |
|
|
|
|
|
| . | . | . | . | . | . | . | . |
|  |  |  |  |  |  |  |  |  |  |  |
|
| . | . |  |  |  |  |  |  |  |  |  |  |
|
|
|
|
|
|
|  |  |  |  |  |  |
|
|
|
|  |  |  |  |
|
|
|
|
|  |  |  |  |  |  |  |  |
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
| . |
. |
. |
. |
. |
. |
. |
. |
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
. |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
L | R | I | I | D | T | E | T | C | G | L | Q | . |
. |
. |
. |
. |
. |
. |
. |
G | G | I | V | E | I | A | S | V | D | V | I | D | G | . |
. |
K | I | V | N | P | M | S | H | L | V | R | P | D | R | P | I | S | P | Q | A | M | A | I | H | R | I | T | E | A | M | V | A | D | K | P | W | I | E | D | V | I | P | H | Y |
Query Conservation |   |
|
|
|
|
|   |
|
|
|
|
|   | . | . | . | . | . | . | . | . |   |   |
|
|
|
|
|   |
|   |
|   |   |   | . | . |   |
|   |   |   |   |   |   |
|
|   |
|   |   |   |
|   |   |   |   |   |   |
|   |
|
|
|   |   |   |
|   |   |   |
|   |   |   |
|   |
|   |   |   |
Alig confidence |   |
|
|
|
|
|
|
|
|
|
|
|
| . | . | . | . | . | . | . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . | . | . | . | . | . | . | . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Template Conservation |   |
|
|
|
|
|
|
|
|   |   |   |   |   |   |
|
|   |   |   |   |
|   |
|
|   |
|
|   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   | . | . | . | . | . | . | . | . | . | . |   |   |   |
|   |   |   |   |
|
|   |   |
|
|   |   |
|
Template Sequence |   |
I | M | S | F | D | I | E | C | A | G | R | I | G | V | F | P | E | P | E | Y | D | P | V | I | Q | I | A | N | V | V | S | I | A | G | A | K | K | P | F | I | R | N | V | F | T | L | N | T | C | S | P | I | T | . |
. |
. |
. |
. |
. |
. |
. |
. |
. |
G | S | M | I | F | S | H | A | T | E | E | E | M | L | S | N | W |
Template Known Secondary structure |   |
 |  |  |  |  |  |  |  |
|
|
| T | T | S |
|
|
| T | T | T |
|
|  |  |  |  |  |  |  |  |  |  | T | T |
| S | S |
| S |  |  |  |  |  |  |  | S |
|
|
|
| B | T | . | . | . | . | . | . | . | . | . | . | T | B |  |  |  |  |  | S | S |  |  |  |  |  |  |  |  |
Template Predicted Secondary structure |   |
 |  |  |  |  |  |  |  |  |
|
|
|
|
|
|
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |
|
|
|
|
|
|
|
|  |  |  |  |  |  |
|
|
|
|
|
|
|
| . | . | . | . | . | . | . | . | . | . |
|
|  |  |  |  |  |
|
|  |  |  |  |  |  |  |  |
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
317 | . | . | 320 | . | . | . | . | . | . | . | . | . | 330 | . | . | . | . | . | . | . | . | . | 340 | . | . | . | . | . | . | . | . | . | 350 | . | . | . | . | . | . | . | . | . | 360 | . | . | . | . | . | . | . | . | . | |
|
|
|
|
|
|
|
|
|
370 | . | . | . | . | . | . | . | . | . | 380 | . | . | . | . | . | . |
  |
  |   |
72 | |
|
|
|
|
|
. | . | . | . | . | . | . | 80 | . | . | |
. | . | . | . | . | . | . | 90 | . | |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
. | . | . | . | . | . | . | . | 100 | . |
Predicted Secondary structure |   |
| . | . | . | . | . | . |
|
|
|  |  |  |  |  |
|  | . |  |  |  |  |  |  |  |  |  | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . |  |
|
|
|  |  |
|  |  |  |
Query SS confidence |   |
| . |
. |
. |
. |
. |
. |
|
|
|
|
|
|
|
|
|
| . |
|
|
|
|
|
|
|
|
| . |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
Y | . |
. |
. |
. |
. |
. |
G | S | E | W | Y | V | A | H | N | A | . |
S | F | D | R | R | V | L | P | E | . |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
M | P | G | E | W | I | C | T | M | K |
Query Conservation |   |
  | . | . | . | . | . | . |   |   |   |   |
|
|
|
|
|   | . |   |
|
|   |   |   |
|   |   | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . |   |   |   |   |   |
|
|
|   |   |
Alig confidence |   |
| . | . | . | . | . | . |
|
|
|
|
|
|
|
|
|
| . |
|
|
|
|
|
|
|
|
| . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . |
|
|
|
|
|
|
|
|
|
|
Template Conservation |   |
  |   |   |
|   |   |   |
|
|
|
|
|   |
|
|
|   |   |   |
|
|
|
|
|
|   |   |
|   |   |   |
|   |
|   |   |   |   |   |   |
|
|   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |
|   |
|
|   |   |
|
|
|   |   |
Template Sequence |   |
R | N | F | I | I | K | V | D | P | D | V | I | I | G | Y | N | T | T | N | F | D | I | P | Y | L | L | N | R | A | K | A | L | K | V | N | D | F | P | Y | F | G | R | L | K | T | V | K | Q | E | I | K | E | S | V | F | S | S | K | A | Y | G | T | R | E | T | K | N | V | N | I | D | G | R | L | Q | L | D | L | L | Q |
Template Known Secondary structure |   |
 |  |  |  |  |  |  |
|
| S |  |  |  |  | S | S | T | T | T | T |  |  |  |  |  |  |  |  |  |  |  | T | T |
| T | T |
| S |
|
| S | S | B | T | T |
|
|
|
| B |
|
|  |  |  |  |  | T | T | T |  |  |  |  |  |
|
| B |
|
| T | T |
|  |  |  |  |  |  |  |
Template Predicted Secondary structure |   |
 |  |  |  |  |  |
|
|
|
|  |  |  |  |  |
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |
|
|
|
|
|
|  |  |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|  |  |  |  |
|
|  |  |  |  |  |  |  |  |
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
387 | . | . | 390 | . | . | . | . | . | . | . | . | . | 400 | . | . | . | . | . | . | . | . | . | 410 | . | . | . | . | . | . | . | . | . | 420 | . | . | . | . | . | . | . | . | . | 430 | . | . | . | . | . | . | . | . | . | 440 | . | . | . | . | . | . | . | . | . | 450 | . | . | . | . | . | . | . | . | . | 460 | . | . | . | . | . | . |
  |
  |   |
102 | . | . | . | . | . | . | . | 110 | . | . | . | . | . | . | . | . | . | 120 | . | . | . | . | . | . | . | . | . | 130 | . | . | . | . | . | . | |
|
|
|
|
|
|
|
|
|
|
. | . | . | 140 | . | . | . | . | . | . | . | . | . | 150 |
Predicted Secondary structure |   |
 |  |  |  |  |
|
|
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|
|
|
|
|
|
|  | . | . | . | . | . | . | . | . | . | . | . |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
L | A | R | R | L | W | P | G | I | K | Y | S | N | M | A | L | Y | K | T | R | K | L | N | V | Q | T | P | P | G | L | H | H | H | R | A | . |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
L | Y | D | C | Y | I | T | A | A | L | L | I | D | I |
Query Conservation |   |
|   |   |   |   |   |
|   |   |   |   |   |   |
|   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |
|
|   |
| . | . | . | . | . | . | . | . | . | . | . |
|   |
|
|   |   |
|
|   |
|   |   |   |
|
Alig confidence |   |
|
|
|
|
|
| . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . | . | . | . | . | . | . | . | . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Template Conservation |   |
  |   |   |   |   |   | . |
|
|   |
|
|   |
|   |   |
|
|   |   |   |
|
|   |   |
|   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |
|   |   |
|   |   |   |
|
|   |
|   |   |   |
|   |   |
|
|
Template Sequence |   |
F | I | Q | R | E | Y | . |
K | L | R | S | Y | T | L | N | A | V | S | A | H | F | L | G | E | Q | S | I | I | S | D | L | Q | N | G | D | S | E | T | R | R | R | L | A | V | Y | C | L | K | D | A | Y | L | P | L | R | L | M | E | K | L |
Template Known Secondary structure |   |
 |  |  |  |  |
| . |
|
| S |
|
|
|  |  |  |  |  |  |  |  |  |
|
|
|
|
|  |  |  |  |  | T | S |
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  | T |
Template Predicted Secondary structure |   |
 |  |  |  |  |
| . |
|
|
|
|
|
|  |  |  |  |  |  |  |  |
|
|
|
|
|
|
|
|
|  |  |  |
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
467 | . | . | 470 | . | . | |
. | . | . | . | . | . | . | 480 | . | . | . | . | . | . | . | . | . | 490 | . | . | . | . | . | . | . | . | . | 500 | . | . | . | . | . | . | . | . | . | 510 | . | . | . | . | . | . | . | . | . | 520 | . | . | . | . | . |
  |