Return to main results Retrieve Phyre Job Id

Job DescriptionP0AEK0
Confidence97.48%DateThu Jan 5 11:23:32 GMT 2012
Rank38Aligned Residues138
% Identity21%Templatec3iayA_
PDB info PDB header:transferase/dnaChain: A: PDB Molecule:dna polymerase delta catalytic subunit; PDBTitle: ternary complex of dna polymerase delta
Resolution2.00 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   2.......10... ......20....... ..30.........40.........50.........60.........70.
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Query Sequence  LRIIDTETCGLQ. . . . . . . . GGIVEIASVDVIDG. . KIVNPMSHLVRPDRPISPQAMAIHRITEAMVADKPWIEDVIPHY
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Template Sequence  IMSFDIECAGRIGVFPEPEYDPVIQIANVVSIAGAKKPFIRNVFTLNTCSPIT. . . . . . . . . . GSMIFSHATEEEMLSNW
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TTS


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   317..320.........330.........340.........350.........360......... 370.........380......
 
   72 .......80.. .......90. ........100.
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Query Sequence  Y. . . . . . GSEWYVAHNA. SFDRRVLPE. . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . MPGEWICTMK
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Template Sequence  RNFIIKVDPDVIIGYNTTNFDIPYLLNRAKALKVNDFPYFGRLKTVKQEIKESVFSSKAYGTRETKNVNIDGRLQLDLLQ
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SSSTTTTTT
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   387..390.........400.........410.........420.........430.........440.........450.........460......
 
   102.......110.........120.........130...... ...140.........150
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Query Sequence  LARRLWPGIKYSNMALYKTRKLNVQTPPGLHHHRA. . . . . . . . . . . LYDCYITAALLIDI
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Template Sequence  FIQREY. KLRSYTLNAVSAHFLGEQSIISDLQNGDSETRRRLAVYCLKDAYLPLRLMEKL
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   467..470.. .......480.........490.........500.........510.........520.....
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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Lawrence Kelley, Benjamin Jefferys 
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