Job Description P0AEK0 Confidence 99.97% Date Thu Jan 5 11:23:32 GMT 2012 Rank 7 Aligned Residues 150 % Identity 34% Template c2p1jB_ PDB info PDB header:transferase Chain: B: PDB Molecule:dna polymerase iii polc-type; PDBTitle: crystal structure of a polc-type dna polymerase iii2 exonuclease domain from thermotoga maritima Resolution 2.50 Å

Show / Hide SS confidence

Show / Hide Conservation and Alignment quality

		2	.	.	.	.	.	.	.	10	.	.	.				.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.				.	.	70	.	.	.	.	.
Predicted Secondary structure														.	.	.																																																							.	.	.
Query SS confidence														.	.	.																																																							.	.	.
Query Sequence		L	R	I	I	D	T	E	T	C	G	L	Q	.	.	.	G	G	I	V	E	I	A	S	V	D	V	I	D	G	K	I	V	N	P	M	S	H	L	V	R	P	D	R	P	I	S	P	Q	A	M	A	I	H	R	I	T	E	A	M	V	A	D	K	P	W	I	E	D	V	.	.	.	I	P	H	Y	Y	G	S	E
Query Conservation														.	.	.																																																							.	.	.
Alig confidence														.	.	.																																																							.	.	.
Template Conservation
Template Sequence		F	V	V	L	D	F	E	T	T	G	L	D	P	Q	V	D	E	I	I	E	I	G	A	V	K	I	Q	G	G	Q	I	V	D	E	Y	H	T	L	I	K	P	S	R	E	I	S	R	K	S	S	E	I	T	G	I	T	Q	E	M	L	E	N	K	R	S	I	E	E	V	L	P	E	F	L	G	F	L	E	D	S
Template Known Secondary structure										S	S	S		T	T	T													T	T													S	S																		T	T																S	S
Template Predicted Secondary structure
Template SS confidence
		358	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420	.	.	.	.	.	.	.	.	.	430	.	.	.	.	.	.	.
		76	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.										.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.
Predicted Secondary structure																		.	.	.	.	.	.	.	.	.
Query SS confidence																		.	.	.	.	.	.	.	.	.
Query Sequence		W	Y	V	A	H	N	A	S	F	D	R	R	V	L	P	E	.	.	.	.	.	.	.	.	.	M	P	G	E	W	I	C	T	M	K	L	A	R	R	L	W	P	G	I	K	Y	S	N	M	A	L	Y	K	T	R	K	L	N	V	Q	T	P	P	G	L	H	H	H	R	A	L	Y	D	C	Y	I	T	A	A	L
Query Conservation																		.	.	.	.	.	.	.	.	.
Alig confidence																		.	.	.	.	.	.	.	.	.																															.	.	.	.	.
Template Conservation																																																									.	.	.	.	.
Template Sequence		I	I	V	A	H	N	A	N	F	D	Y	R	F	L	R	L	W	I	K	K	V	M	G	L	D	W	E	R	P	Y	I	D	T	L	A	L	A	K	S	L	L	K	L	R	S	Y	S	L	D	S	V	V	E	K	L	.	.	.	.	.	G	L	G	P	F	R	H	H	R	A	L	D	D	A	R	V	T	A	Q	V
Template Known Secondary structure						T	T																																						S												.	.	.	.	.	T							S
Template Predicted Secondary structure																																																									.	.	.	.	.
Template SS confidence
		438	.	440	.	.	.	.	.	.	.	.	.	450	.	.	.	.	.	.	.	.	.	460	.	.	.	.	.	.	.	.	.	470	.	.	.	.	.	.	.	.	.	480	.	.	.	.	.	.	.	.	.	490	.	.						.	.	.	.	.	.	.	500	.	.	.	.	.	.	.	.	.	510	.	.
		147	.	.	150	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		L	I	D	I	M	N	T	S	G	W
Query Conservation
Alig confidence
Template Conservation
Template Sequence		F	L	R	F	V	E	M	M	K	K
Template Known Secondary structure									T	T	S
Template Predicted Secondary structure
Template SS confidence
		513	.	.	.	.	.	.	520	.	.

---

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions