Return to main results Retrieve Phyre Job Id

Job DescriptionP0A7E5
Confidence71.59%DateThu Jan 5 11:05:30 GMT 2012
Rank221Aligned Residues83
% Identity13%Templated1guda_
SCOP infoPeriplasmic binding protein-like I Periplasmic binding protein-like I L-arabinose binding protein-like
Resolution1.7

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   291........300.........310.........320.........330.........340.. .......350.........360.....
Predicted Secondary structure 
















.....












Query SS confidence 



















































. . . . .






















Query Sequence  TIGMVGKYIELPDAYKSVIEALKHGGLKNRVSVNIKLIDSQDVETRGVEILK. . . . . GLDAILVPGGFGYRGVEGMITTA
Query Conservation   






    


 

  

 


      
 
 



  

    
 
 .....  









 




 
 

Alig confidence 










.







































.....








....









Template Conservation 




      . 
      

   
   
    
       
       
        
 

   ....          
Template Sequence  EYAVVLKTLSN. PFWVDMKKGIEDEAKTLGVSVDIFASPSEGDFQSQLQLFEDLSNKNYKGIAFAP. . . . LSSVNLVMPV
Template Known Secondary structure  S
SSS.T


SSTT
TSS

....SSSSTT
Template Predicted Secondary structure 





.














....





Template SS confidence 















































































   3......10... ......20.........30.........40.........50.........60....... ..70.......
 
   366...370........
Predicted Secondary structure 



Query SS confidence 












Query Sequence  RFARENNIPYLGI
Query Conservation 
 


  





Alig confidence 












Template Conservation         
     
Template Sequence  ARAWKKGIYLVNL
Template Known Secondary structure  TT
Template Predicted Secondary structure 


Template SS confidence 












   78.80.........90
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions