 |
Job Description | P0A7E5 | Confidence | 64.77% | Date | Thu Jan 5 11:05:30 GMT 2012 |
Rank | 322 | Aligned Residues | 81 |
% Identity | 14% | Template | c3o1hB_ |
PDB info |
PDB header:signaling protein | Chain: B: PDB Molecule:periplasmic protein tort; |
PDBTitle: crystal structure of the tors sensor domain - tort complex in the2 presence of tmao
|
Resolution | 3.10 Å |
|
 |
  |   |
291 | . | . | . | . | . | . | . | . | 300 | . | . | . | . | . | . | . | . | . | 310 | . | . | . | . | . | . | . | . | . | 320 | . | . | . | . | . | . | . | . | . | 330 | . | . | . | . | . | . | . | . | . | 340 | . | . | |
|
|
|
|
. | . | . | . | . | . | . | 350 | . | . | . | . | . | . | . | . | . | 360 | . | . | . | . | . |
Predicted Secondary structure |   |
 |  |  |  |  |  |
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|  |  |  |  |  |  |
|  |  |
|
|
|
|
|
|  |  |  |  |  | . | . | . | . | . |  |
|
|  |  |  |  |
|
|
|
|
|
|
|
|
|
|
|  |  |  |  |  |
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
. |
. |
. |
. |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
T | I | G | M | V | G | K | Y | I | E | L | P | D | A | Y | K | S | V | I | E | A | L | K | H | G | G | L | K | N | R | V | S | V | N | I | K | L | I | D | S | Q | D | V | E | T | R | G | V | E | I | L | K | . |
. |
. |
. |
. |
G | L | D | A | I | L | V | P | G | G | F | G | Y | R | G | V | E | G | M | I | T | T | A |
Query Conservation |   |
  |
|
|
|
|
|
|
|   |   |   |   |
|
|
|   |
|
|   |   |
|
|   |
|
|
|   |   |   |   |   |   |
|   |
|   |
|
|
|
|   |   |
|
|   |   |   |   |
|   |
|   | . | . | . | . | . |   |   |
|
|
|
|
|
|
|
|
|
|   |
|
|
|
|
|   |
|   |
|
|
Alig confidence |   |
|
|
|
|
|
|
|
|
|
| . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . | . | . | . |
|
|
|
|
|
|
|
|
| . | . | . | . |
|
|
|
|
|
|
|
|
|
|
Template Conservation |   |
  |
|   |
|   |   |
|   |
|   | . |   |   |   |
|   |   |
|   |   |
|   |   |   |   |
|   |   |   |
|   |   |
|   |   |   |   |   |   |   |   |   |
|   |   |   |
|   |   |   |
|   |   |   |
|   |   |   |   |
|
|
|
|
|   |   | . | . | . | . |   |   |   |   |   |   |   |   |   |   |
Template Sequence |   |
K | I | C | A | I | Y | P | H | L | K | . |
D | S | Y | W | L | S | V | N | Y | G | M | V | S | E | A | E | K | Q | G | V | N | L | R | V | L | E | A | G | G | Y | P | N | K | S | R | Q | E | Q | Q | L | A | L | C | T | Q | W | G | A | N | A | I | I | L | G | T | . |
. |
. |
. |
V | D | P | H | A | Y | E | H | N | L |
Template Known Secondary structure |   |
 |  |  |  |  |  | S |
|
|
| . | S |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  | T | T |
|  |  |  |  |  |  |
| S | S | T | T |
|  |  |  |  |  |  |  |  |  |  |  |  |  | T | T |
| S |  |  |  |  |
|
| . | . | . | . | S | S | T | T | T | T | T | T | T | T |
Template Predicted Secondary structure |   |
 |  |  |  |  |  |
|
|
|
| . |
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|  |  |  |  |  |  |
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|  |  |  |  |  |
| . | . | . | . |
|
|
|
|  |  |  |  |  |  |
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
32 | . | . | . | . | . | . | . | 40 | . | |
. | . | . | . | . | . | . | . | 50 | . | . | . | . | . | . | . | . | . | 60 | . | . | . | . | . | . | . | . | . | 70 | . | . | . | . | . | . | . | . | . | 80 | . | . | . | . | . | . | . | . | . | 90 | . | . | . | . | . | . | |
|
|
|
. | . | . | 100 | . | . | . | . | . | . |
  |
  |   |
366 | . | . | . | 370 | . | . | . | . | . | . |
Predicted Secondary structure |   |
 |  |  |  |  |
|
|
|
|  |  |
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
R | F | A | R | E | N | N | I | P | Y | L |
Query Conservation |   |
|   |
|
|
|   |   |
|
|
|
|
Alig confidence |   |
|
|
|
|
|
|
|
|
|
|
|
Template Conservation |   |
  |   |   |   |   |   |   |   |   |
|
|
Template Sequence |   |
K | S | W | V | G | N | T | P | V | F | A |
Template Known Secondary structure |   |
 |  |  |  | T | T |
|
|  |  |  |
Template Predicted Secondary structure |   |
 |  |  |  |  |
|
|
|  |  |  |
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
  |   |
107 | . | . | 110 | . | . | . | . | . | . | . |
  |
No model constructed - rank, confidence too low
Phyre is for academic use only
Please cite: Protein structure prediction on
the web: a case study using the Phyre server |
Kelley LA and Sternberg MJE. Nature Protocols
4, 363 - 371 (2009) [pdf] [Import into BibTeX] |
  |
|
|