 |
Job Description | P0A7E5 | Confidence | 76.72% | Date | Thu Jan 5 11:05:30 GMT 2012 |
Rank | 173 | Aligned Residues | 76 |
% Identity | 16% | Template | c3mwdB_ |
PDB info |
PDB header:transferase | Chain: B: PDB Molecule:atp-citrate synthase; |
PDBTitle: truncated human atp-citrate lyase with citrate bound
|
Resolution | 2.10 Å |
|
 |
  |   |
296 | . | . | . | 300 | . | . | . | . | . | . | . | . | . | 310 | . | . | . | . | . | . | . | . | . | 320 | . | . | . | . | . | . | . | . | . | 330 | . | . | . | . | . | . | . | . | . | 340 | . | . | |
|
. | . | . | . | . | . | . | |
350 | . | . | . | . | . | . | . | . | . | 360 | . | . | . | . | . | . | . | . | . | 370 | . | . |
Predicted Secondary structure |   |
 |
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|  |  |  |  |  |  |
|  |  |
|
|
|
|
|
|  |  |  |  |  | . | . |  |
|
|  |  |  |  | . |
|
|
|
|
|
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |
|
|
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
. |
|
|
|
|
|
|
| . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
G | K | Y | I | E | L | P | D | A | Y | K | S | V | I | E | A | L | K | H | G | G | L | K | N | R | V | S | V | N | I | K | L | I | D | S | Q | D | V | E | T | R | G | V | E | I | L | K | . |
. |
G | L | D | A | I | L | V | . |
P | G | G | F | G | Y | R | G | V | E | G | M | I | T | T | A | R | F | A | R | E | N | N |
Query Conservation |   |
|
|
|   |   |   |   |
|
|
|   |
|
|   |   |
|
|   |
|
|
|   |   |   |   |   |   |
|   |
|   |
|
|
|
|   |   |
|
|   |   |   |   |
|   |
|   | . | . |   |   |
|
|
|
|
| . |
|
|
|
|
|   |
|
|
|
|
|   |
|   |
|
|
|   |
|
|
|   |   |
Alig confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . |
|
|
|
|
|
|
| . |
|
|
|
|
|
| . | . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Template Conservation |   |
|   |   |
|   |
|
|
|
|
|   |
|
|   |
|
|   |   |   | . | . | . |   |   |   |
|
|
|
|
|
|   |
|
|
|   |   |
|   |   |
|
|   |
|
|   |   |   |   |
|
|
|   |
|
|
|
|
|   |
|
|   |
| . | . | . |   |   |   |   |   |
|   |   |   |
|   |   |   |
|
Template Sequence |   |
G | H | K | E | I | L | I | P | V | F | K | N | X | A | D | A | X | R | K | . |
. |
. |
H | P | E | V | D | V | L | I | N | F | A | S | L | R | S | A | Y | D | S | T | X | E | T | X | N | Y | A | Q | I | R | T | I | A | I | I | A | E | G | I | P | E | . |
. |
. |
A | L | T | R | K | L | I | K | K | A | D | Q | K | G |
Template Known Secondary structure |   |
T | T |  |  |  |  |  |  |  |  | S | S |  |  |  |  |  |  |  | . | . | . |
| T | T |
|
|  |  |  |  |
|
|
| T | T | T |  |  |  |  |  |  |  |  | T | T | S | T | T |
|
|  |  |  |  |
|
| S |
|
|
|  | . | . | . |  |  |  |  |  |  |  |  |  |  |  |  |  | T |
Template Predicted Secondary structure |   |
|
|  |  |  |  |  |  |
|
|
|
|  |  |  |  |  |  |
| . | . | . |
|
|
|
|
|  |  |  |  |  |
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|  |  |  |  |  |  |
|
|
|
|  | . | . | . |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
544 | . | . | . | . | . | 550 | . | . | . | . | . | . | . | . | . | 560 | . | . | |
|
|
. | . | . | . | . | . | . | 570 | . | . | . | . | . | . | . | . | . | 580 | . | . | . | . | . | . | . | . | . | 590 | . | . | . | . | . | . | . | . | . | 600 | . | . | . | |
|
|
. | . | . | . | . | . | 610 | . | . | . | . | . | . | . |
  |
  |   |
373 | . | . | . | . |
Predicted Secondary structure |   |
|
|  |  |  |
Query SS confidence |   |
|
|
|
|
|
Query Sequence |   |
I | P | Y | L | G |
Query Conservation |   |
|
|
|
|
|
Alig confidence |   |
|
|
|
|
|
Template Conservation |   |
|
|
|
|
|
Template Sequence |   |
V | T | I | I | G |
Template Known Secondary structure |   |
|  |  |  |
|
Template Predicted Secondary structure |   |
|  |  |  |
|
Template SS confidence |   |
|
|
|
|
|
  |   |
618 | . | 620 | . | . |
  |
No model constructed - rank, confidence too low
Phyre is for academic use only
Please cite: Protein structure prediction on
the web: a case study using the Phyre server |
Kelley LA and Sternberg MJE. Nature Protocols
4, 363 - 371 (2009) [pdf] [Import into BibTeX] |
  |
|
|