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Job Description | P0A7E5 | Confidence | 55.98% | Date | Thu Jan 5 11:05:30 GMT 2012 |
Rank | 401 | Aligned Residues | 89 |
% Identity | 10% | Template | c3lopA_ |
PDB info |
PDB header:substrate binding protein | Chain: A: PDB Molecule:substrate binding periplasmic protein; |
PDBTitle: crystal structure of substrate-binding periplasmic protein2 (pbp) from ralstonia solanacearum
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Resolution | 1.55 Å |
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289 | 290 | . | . | . | . | . | . | . | . | . | 300 | . | . | . | . | . | |
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Predicted Secondary structure |   |
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Query Sequence |   |
E | V | T | I | G | M | V | G | K | Y | I | E | L | P | D | A | Y | . |
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R | V | S | V | N | I | K | L | I | D | S | Q | D | V | E | T | R | G | V | E | I | L | K | G | L | . |
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Alig confidence |   |
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Template Conservation |   |
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Template Sequence |   |
D | I | S | V | I | Q | S | L | P | L | S | G | S | Q | A | V | T | G | R | A | L | N | A | G | A | R | L | Y | F | D | W | L | N | L | N | G | G | I | N | G | E | T | I | R | L | V | A | R | D | D | E | Q | K | I | E | Q | T | V | R | N | V | R | D | X | A | R | V | D | N | P | V | A | L | L | T | V | V | G | T | A |
Template Known Secondary structure |   |
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| S | S | S | T | T |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  | T | T | T | B | T | T | B |
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Template Predicted Secondary structure |   |
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Template SS confidence |   |
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35 | . | . | . | . | 40 | . | . | . | . | . | . | . | . | . | 50 | . | . | . | . | . | . | . | . | . | 60 | . | . | . | . | . | . | . | . | . | 70 | . | . | . | . | . | . | . | . | . | 80 | . | . | . | . | . | . | . | . | . | 90 | . | . | . | . | . | . | . | . | . | 100 | . | . | . | . | . | . | . | . | . | 110 | . | . | . | . |
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358 | . | 360 | . | . | . | . | . | . | . | . | . | 370 | . | . | . | . | . | . | . |
Predicted Secondary structure |   |
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Query SS confidence |   |
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Query Sequence |   |
V | E | G | M | I | T | T | A | R | F | A | R | E | N | N | I | P | Y | L | G |
Query Conservation |   |
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Alig confidence |   |
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Template Conservation |   |
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Template Sequence |   |
N | V | E | A | L | X | R | E | G | V | L | A | E | A | R | L | P | L | V | G |
Template Known Secondary structure |   |
 |  |  |  |  |  |  | T | T |  |  |  |  |  | T |
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Template Predicted Secondary structure |   |
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Template SS confidence |   |
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  |   |
115 | . | . | . | . | 120 | . | . | . | . | . | . | . | . | . | 130 | . | . | . | . |
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No model constructed - rank, confidence too low
Phyre is for academic use only
Please cite: Protein structure prediction on
the web: a case study using the Phyre server |
Kelley LA and Sternberg MJE. Nature Protocols
4, 363 - 371 (2009) [pdf] [Import into BibTeX] |
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