Job Description P0A7E5 Confidence 99.95% Date Thu Jan 5 11:05:30 GMT 2012 Rank 11 Aligned Residues 198 % Identity 21% Template c3fijD_ PDB info PDB header:structural genomics, unknown function Chain: D: PDB Molecule:lin1909 protein; PDBTitle: crystal structure of a uncharacterized protein lin1909 Resolution 2.30 Å

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		292	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.								.	.	.	.	.	.	.	360	.
Predicted Secondary structure																																																															.	.	.	.	.	.	.										.	.	.
Query SS confidence																																																															.	.	.	.	.	.	.										.	.	.
Query Sequence		I	G	M	V	G	K	Y	I	E	L	P	D	A	Y	K	S	V	I	E	A	L	K	H	G	G	L	K	N	R	V	S	V	N	I	K	L	I	D	S	Q	D	V	E	T	R	G	V	E	I	L	K	G	L	D	A	I	L	V	P	G	G	.	.	.	.	.	.	.	F	G	Y	R	G	V	E	G	M	.	.	.
Query Conservation																																																															.	.	.	.	.	.	.										.	.	.
Alig confidence							.	.	.	.	.	.	.	.															.	.	.	.										.	.	.																			.	.	.	.	.	.	.										.	.	.
Template Conservation							.	.	.	.	.	.	.	.															.	.	.	.										.	.	.
Template Sequence		I	G	I	T	G	.	.	.	.	.	.	.	.	Q	Q	R	Y	V	D	A	I	Q	K	V	G	G	F	.	.	.	.	P	I	A	L	P	I	D	D	P	.	.	.	S	T	A	V	Q	A	I	S	L	V	D	G	L	L	L	T	G	G	Q	D	I	T	P	Q	L	Y	L	E	E	P	S	Q	E	I	G	A	Y
Template Known Secondary structure							.	.	.	.	.	.	.	.											T	T			.	.	.	.									G	.	.	.	G	G							T		S								S				G	G	G	G	T					T	T
Template Predicted Secondary structure							.	.	.	.	.	.	.	.															.	.	.	.										.	.	.
Template SS confidence
		7	.	.	10	.									.	.	.	.	.	.	.	.	20	.	.	.	.	.					.	.	.	.	30	.	.	.	.				.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.
										362	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420	.	.	.	.	.	.	.	.	.	430	.	.	.
Predicted Secondary structure		.	.	.	.	.	.	.	.
Query SS confidence		.	.	.	.	.	.	.	.
Query Sequence		.	.	.	.	.	.	.	.	I	T	T	A	R	F	A	R	E	N	N	I	P	Y	L	G	I	C	L	G	M	Q	V	A	L	I	D	Y	A	R	H	V	A	N	M	E	N	A	N	S	T	E	F	V	P	D	C	K	Y	P	V	V	A	L	I	T	E	W	R	D	E	N	G	N	V	E	V	R	S	E	K	S
Query Conservation		.	.	.	.	.	.	.	.
Alig confidence		.	.	.	.	.	.	.	.																																														.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																																																							.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		F	P	P	R	D	S	Y	E	I	A	L	V	R	A	A	L	D	A	G	K	P	I	F	A	I	C	R	G	X	Q	L	V	N	V	A	L	G	G	T	L	Y	Q	D	I	S	Q	V	E	T	K	A	L	Q	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	H
Template Known Secondary structure																				T							T										T	T					S	S	G	G	G	S	S	S					.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Predicted Secondary structure																																																							.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.																											.
		434	.	.	.	.	.	440	.	.	.	.	.	.	.	.	.	450	.	.	.	.	.	.	.	.	.	460	.	.	.	.	.	.	.	.	.	470	.	.	.	.	.	.	.	.	.	480	.	.	.	.	.	.	.	.	.	490	.	.	.	.	.	.	.	.	.	500	.	.	.	.	.	.	.		.	.	510	.	.
Predicted Secondary structure																																																																												.
Query SS confidence																																																																												.
Query Sequence		D	L	G	G	T	M	R	L	G	A	Q	Q	C	Q	L	V	D	D	S	L	V	R	Q	L	Y	N	A	P	T	I	V	E	R	H	R	H	R	Y	E	V	N	N	M	L	L	K	Q	I	E	D	A	G	L	R	V	A	G	R	S	G	D	D	Q	L	V	E	I	I	E	V	P	N	H	P	.	W	F	V	A	C
Query Conservation																																																																												.
Alig confidence																											.																		.	.	.	.	.	.														.												.
Template Conservation																											.																		.	.	.	.	.	.														.
Template Sequence		L	Q	R	V	D	E	Q	L	G	S	H	T	I	D	I	E	P	T	S	E	L	A	K	H	H	.	P	N	K	K	L	V	N	S	L	H	H	Q	F	I	K	K	L	.	.	.	.	.	.	A	P	S	F	K	V	T	A	R	T	A	D	G	.	X	I	E	A	V	E	G	D	N	L	P	S	W	Y	L	G	V
Template Known Secondary structure		B			S		T	T	S									T	T	S	T	G	G	G	T	S	.		T	T						B		S					S		.	.	.	.	.	.		T	T								T	T		.								S	S		S	S
Template Predicted Secondary structure																											.																		.	.	.	.	.	.														.
Template SS confidence
		144	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.		.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.							.	.	.	.	190	.	.	.	.	.	.	.	.		.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.
		513	.	.	.	.	.	.	520	.	.	.	.	.	.		.	.	.	530	.	.	.	.	.	.	.	.
Predicted Secondary structure																.
Query SS confidence																.
Query Sequence		Q	F	H	P	E	F	T	S	T	P	R	D	G	H	.	P	L	F	A	G	F	V	K	A	A	S	E
Query Conservation																.
Alig confidence																.
Template Conservation
Template Sequence		Q	W	H	P	E	L	X	F	Q	T	D	P	E	S	E	Q	L	F	Q	A	L	V	D	E	S	K	K
Template Known Secondary structure		S	S		G	G	G	T	T	T	T																	T
Template Predicted Secondary structure
Template SS confidence
		216	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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