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Job DescriptionP0A7E5
Confidence99.88%DateThu Jan 5 11:05:30 GMT 2012
Rank25Aligned Residues178
% Identity24%Templatec2vxoB_
PDB info PDB header:ligaseChain: B: PDB Molecule:gmp synthase [glutamine-hydrolyzing]; PDBTitle: human gmp synthetase in complex with xmp
Resolution2.5 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   291........300.........310.........320.........330.........340.........350.........360.........370
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Query Sequence  TIGMVGKYIELPDAYKSVIEALKHGGLKNRVSVNIKLIDSQDVETRGVEILKGLDAILVPGGFGYRGVEGMITTARFARE
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Template Sequence  AVVIL. . . . . . . DAGAQYGKVIDRRVRELFVQSEIFPLET. . . . PAFAIKEQGFRAIIISGGPNSVYAEDAPWFDPAIFT
Template Known Secondary structure 
.......SSSSTT

TT
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T
S

S

TTSTT




GGGGT
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   27..30. ........40.........50......... 60.........70.........80.........90.....
 
   371........380.........390.........400.........410.........420.........430.........440.........450
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Query Sequence  NNIPYLGICLGMQVALIDYARHVANMENANSTEFVPDCKYPVVALITEWRDENGNVEVRSEKSDLGGTMRLGAQQCQLVD
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Template Sequence  IGKPVLGICYGMQMMNKVFGGTVHKKS. . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . DGVFNISVDN
Template Known Secondary structure  SSS
TTT

B
S

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T
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   96...100.........110.........120.. .......130..
 
   451........460.........470.........480.........490.........500.........510.........520.........530
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Query Sequence  DSLVRQLYNAPTIVERHRHRYEVNNMLLKQIEDAGLRVAGRSGDDQLVEIIEVPNHPWFVACQFHPEFTSTPRDGHPLFA
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Template Sequence  TCSLFRGL. QKEEVVLLTHGDSVDKV. . . . . . ADGFKVVARSGNI. . VAGIANESKKLY. GAQFHPEVGLTE. NGKVILK
Template Known Secondary structure  TSGGGTT
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SB

S

BSS
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TT
TT..TTTT.SB
TTSTTST.T
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   136...140... ......150.........160 .........170... ......180..... ....190....... ..200....
 
   531..
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Query Sequence  GFV
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Template Sequence  NFL
Template Known Secondary structure 
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   205..
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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Lawrence Kelley, Benjamin Jefferys 
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