 |
Job Description | P0A7E5 | Confidence | 53.79% | Date | Thu Jan 5 11:05:30 GMT 2012 |
Rank | 412 | Aligned Residues | 85 |
% Identity | 7% | Template | c2rjoA_ |
PDB info |
PDB header:signaling protein | Chain: A: PDB Molecule:twin-arginine translocation pathway signal protein; |
PDBTitle: crystal structure of twin-arginine translocation pathway signal2 protein from burkholderia phytofirmans
|
Resolution | 2.05 Å |
|
 |
  |   |
291 | . | . | . | . | . | . | . | . | 300 | . | . | . | . | . | . | . | . | . | 310 | . | . | . | . | . | . | . | . | . | 320 | . | . | . | . | . | . | . | . | . | 330 | . | . | . | |
. | . | . | . | . | . | 340 | . | |
|
. | . | . | . | . | . | . | . | 350 | . | . | . | . | . | . | . | . | . | 360 | . | . | . | . | . | . | . |
Predicted Secondary structure |   |
 |  |  |  |  |  |
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|  |  |  |  |  |  |
|  |  |
|
| . |
|
|
|
|  |  |  |  | . | . |  |  |
|
|  |  |  |  |
|
|
|
|
|
|
|
|
|
|
|  |  |  |  |  |  |  |
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
|
|
|
|
|
|
|
| . |
. |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
T | I | G | M | V | G | K | Y | I | E | L | P | D | A | Y | K | S | V | I | E | A | L | K | H | G | G | L | K | N | R | V | S | V | N | I | K | L | I | D | S | Q | D | V | . |
E | T | R | G | V | E | I | L | . |
. |
K | G | L | D | A | I | L | V | P | G | G | F | G | Y | R | G | V | E | G | M | I | T | T | A | R | F |
Query Conservation |   |
  |
|
|
|
|
|
|
|   |   |   |   |
|
|
|   |
|
|   |   |
|
|   |
|
|
|   |   |   |   |   |   |
|   |
|   |
|
|
|
|   |   |
| . |
|   |   |   |   |
|   |
| . | . |   |   |   |
|
|
|
|
|
|
|
|
|
|   |
|
|
|
|
|   |
|   |
|
|
|   |
Alig confidence |   |
|
|
|
|
|
|
|
|
|
| . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
|
|
|
|
|
|
|
| . | . |
|
|
|
|
|
|
|
|
|
|
|
|
| . | . |
|
|
|
|
|
|
|
|
|
|
|
Template Conservation |   |
|
|
|
|   |   |   |   |   |   | . |   |   |
|   |   |   |   |   |   |
|   |   |   |   |
|   |   |   |
|   |   |   |   |   |   |   |   |   |   |
|   |   |   |
|   |   |   |
|   |   |   |
|   |   |   |   |
|   |
|
|
|   |   |   |   |   | . | . |   |   |   |   |   |   |   |   |   |   |   |
Template Sequence |   |
T | L | A | C | S | F | R | S | L | T | . |
N | P | Y | Y | T | A | F | N | K | G | A | Q | S | F | A | K | S | V | G | L | P | Y | V | P | L | T | T | E | G | S | S | E | K | G | I | A | D | I | R | A | L | L | Q | K | T | G | G | N | L | V | L | N | V | D | P | N | . |
. |
D | S | A | D | A | R | V | I | V | E | A |
Template Known Secondary structure |   |
 |  |  |  |  |  | S |
| T | T | . | S |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  | T |
|
|  |  |  |  |  |
| T | T |
|  |  |  |  |  |  |  |  |  |  |  |  |  |  | T | T | T |
|  |  |  |  |  |
|
| S | . | . | S |  |  |  |  |  |  |  |  |  |  |
Template Predicted Secondary structure |   |
 |  |  |  |  |  |
|
|
|
| . |
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|  |  |  |  |  |  |
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|  |  |  |  |  |
|
|
|
| . | . |
|
|
|
|  |  |  |  |  |  |  |
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
42 | . | . | . | . | . | . | . | 50 | . | |
. | . | . | . | . | . | . | . | 60 | . | . | . | . | . | . | . | . | . | 70 | . | . | . | . | . | . | . | . | . | 80 | . | . | . | . | . | . | . | . | . | 90 | . | . | . | . | . | . | . | . | . | 100 | . | . | . | . | . | . | . | |
|
. | . | 110 | . | . | . | . | . | . | . | . |
  |
  |   |
368 | . | 370 | . | . | . | . | . | . | . | . |
Predicted Secondary structure |   |
 |  |  |
|
|
|
|  |  |  |  |
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
A | R | E | N | N | I | P | Y | L | G | I |
Query Conservation |   |
|
|
|   |   |
|
|
|
|
|
|
Alig confidence |   |
|
|
|
|
|
|
|
|
|
|
|
Template Conservation |   |
|   |   |   |
|
|   |
|
|   |   |
Template Sequence |   |
C | S | K | A | G | A | Y | V | T | T | I |
Template Known Secondary structure |   |
 |  |  |  | T |
|  |  |  |  |  |
Template Predicted Secondary structure |   |
 |  |  |
|
|
|  |  |  |  |  |
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
  |   |
119 | 120 | . | . | . | . | . | . | . | . | . |
  |
No model constructed - rank, confidence too low
Phyre is for academic use only
Please cite: Protein structure prediction on
the web: a case study using the Phyre server |
Kelley LA and Sternberg MJE. Nature Protocols
4, 363 - 371 (2009) [pdf] [Import into BibTeX] |
  |
|
|