Job Description P0A7E5 Confidence 96.94% Date Thu Jan 5 11:05:30 GMT 2012 Rank 49 Aligned Residues 177 % Identity 16% Template c2qmoA_ PDB info PDB header:ligase Chain: A: PDB Molecule:dethiobiotin synthetase; PDBTitle: crystal structure of dethiobiotin synthetase (biod) from helicobacter2 pylori Resolution 1.47 Å

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		6	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.																		.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.
Predicted Secondary structure																																								.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																																								.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		I	F	V	T	G	G	V	V	S	S	L	G	K	G	I	A	A	A	S	L	A	A	I	L	E	A	R	G	L	N	V	T	I	M	K	L	D	P	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	Y	I	N	V	D	P	G	T	M	S	P	I	Q	H	G	E	V	F	V	T	E	D	G	A	E
Query Conservation																																								.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence																																								.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		X	L	F	I	S	A	T	N	T	N	A	G	K	T	T	C	A	R	L	L	A	Q	Y	C	N	A	C	G	V	K	T	I	L	L	K	P	I	E	T	G	V	N	D	A	I	N	H	S	S	D	A	H	L	F	L	Q	D	N	R	L	L	D	R	S	L	T	L	K	D	I	S	F	Y	R	Y	H	K	V	S	A
Template Known Secondary structure								S	S	T	T	S																T	T												S			T	T	T				S										T	T	T		T	T												S	S		S
Template Predicted Secondary structure
Template SS confidence
		1	.	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80
		69	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.			.
Predicted Secondary structure																																																																															.	.
Query SS confidence																																																																															.	.
Query Sequence		T	D	L	D	L	G	H	Y	E	R	F	I	R	T	K	M	S	R	R	N	N	F	T	T	G	R	I	Y	S	D	V	L	R	K	E	R	R	G	D	Y	L	G	A	T	V	Q	V	I	P	H	I	T	N	A	I	K	E	R	V	L	E	G	G	E	G	H	D	V	V	L	V	E	I	G	G	T	V	.	.	G
Query Conservation																																																																															.	.
Alig confidence																		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																										.	.
Template Conservation																		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		P	L	I	A	Q	Q	E	E	D	P	N	A	P	I	D	T	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	D	N	L	T	Q	R	L	H	N	F	T	K	T	Y	D	L	V	I	V	E	G	A	G	G	L	C	V	P
Template Known Secondary structure											T	T						.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.										G	G	G	T		S							S	S		T	T		B
Template Predicted Secondary structure																		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		81	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.																																					.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.
		147	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.						.	.	.	.	220	.
Predicted Secondary structure																																																																							.	.	.	.	.
Query SS confidence																																																																							.	.	.	.	.
Query Sequence		D	I	E	S	L	P	F	L	E	A	I	R	Q	M	A	V	E	I	G	R	E	H	T	L	F	M	H	L	T	L	V	P	Y	M	A	A	S	G	E	V	K	T	K	P	T	Q	H	S	V	K	E	L	L	S	I	G	I	Q	P	D	I	L	I	C	R	S	D	R	A	.	.	.	.	.	V	P	A	N	E	R
Query Conservation																																																																							.	.	.	.	.
Alig confidence																			.	.	.	.	.														.	.	.	.	.	.	.	.																											.	.	.	.	.
Template Conservation																			.	.	.	.	.														.	.	.	.	.	.	.	.
Template Sequence		I	T	L	E	E	N	X	L	D	F	A	L	K	L	K	A	K	.	.	.	.	.	X	L	L	I	S	H	D	N	L	G	L	I	N	.	.	.	.	.	.	.	.	D	C	L	L	N	D	F	L	L	K	S	H	Q	L	D	Y	K	I	A	I	N	L	K	G	N	N	T	A	F	H	S	I	S	L	P	Y	I
Template Known Secondary structure		S	S	S	S		B									T			.	.	.	.	.								S	T	T				.	.	.	.	.	.	.	.											T	S	S	S										T	T		S	S					T
Template Predicted Secondary structure																			.	.	.	.	.														.	.	.	.	.	.	.	.
Template SS confidence
		125	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.						.	.	.	.	.	.	.	.	150	.	.	.	.									.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.
		222	.	.	.	.	.	.	.	230	.
Predicted Secondary structure
Query SS confidence
Query Sequence		A	K	I	A	L	F	C	N	V	P
Query Conservation
Alig confidence
Template Conservation
Template Sequence		E	L	F	N	T	R	S	N	N	P
Template Known Secondary structure									S	S
Template Predicted Secondary structure
Template SS confidence
		192	.	.	.	.	.	.	.	200	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions